Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq14537 320 2e-82 seq14703 111 2e-19 seq7053 96.9 5e-15 seq3173 96.9 5e-15 >seq14537 Length=2063196 Score = 320 bits (354), Expect = 2e-82 Identities = 1046/1612 (65%), Gaps = 15/1612 (1%) Strand=Plus/Plus Query 71408 CGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTAT 71467 |||| || | || || ||||| | || | || || ||||| ||||| |||| | | Sbjct 886002 CGGCCAGCTGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGT 886061 Query 71468 TGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 71527 | || || || || ||||| || || || || | ||| || || ||||| || | Sbjct 886062 TCAGCAGCTGAGCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCA 886121 Query 71528 ATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAA 71587 || || ||||| || ||||| || | ||| | | | || || || || || || | Sbjct 886122 GCCCCTGGACGCCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTCGGGCA 886181 Query 71588 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACAT 71647 || || || || || || || || || || || |||||||| | || ||| ||| Sbjct 886182 CCGGGTAGTAGTTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACGG 886241 Query 71648 CCTTTAGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAACAG 71704 | || ||| | || || || | | || | || ||| ||| | || | | Sbjct 886242 CGGCCAGCTTGTGGAAGTCGAAGGTGCACTCGGGGGTGACGTACATGTTGAGCGCGATGG 886301 Query 71705 ATGCCAGATTACAAACGGCTACCTCATTAGCATC-GGCATATTGTATAATTTCAGTGCAA 71763 | ||||| || || ||||| ||||| | || | || |||| | || || ||||| Sbjct 886302 AGGCCAGGTTGCAGACGGCCACCTCGTC-GCTGCTGGTGTATTCCACGATCTCCGTGCAC 886360 Query 71764 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 71823 || || || | |||||||| || | || || || || ||||| |||| || || || Sbjct 886361 AGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCT 886420 Query 71824 TTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 71883 || || || || |||| || || ||||| |||| || || || || || | ||| || Sbjct 886421 TTGTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACC 886480 Query 71884 ACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATAATC 71941 | ||||| | | |||| | || | ||||| ||||| | || Sbjct 886481 TGCTGGGCCTTCACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTC 886540 Query 71942 GTTCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAAT 72000 || ||||| || ||||| ||| | || || || || ||||| | ||||||||||| Sbjct 886541 --TCAAACTCCTCCCCCCA-GCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGA 886597 Query 72001 GACCACT-CTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 72059 ||||| | || | || | || | ||||| || | || || ||||| || || Sbjct 886598 GACCAGTCCTGGTTGCTC-TCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTA 886656 Query 72060 AAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 72119 || || || |||| ||| |||||||| || || || ||||| || || || ||||| | Sbjct 886657 GAACAGGTCCCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTC 886716 Query 72120 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCC 72179 | | || | ||||| || |||| ||| ||||| | | || ||||| ||||| || Sbjct 886717 AAAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCC 886776 Query 72180 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 72239 |||||| || | ||| | || ||||| || |||||||||| ||| || | | || || Sbjct 886777 TCCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTT 886836 Query 72240 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAG 72299 ||| || ||||| |||| ||| || || || |||| || || ||| | | | Sbjct 886837 GGAGTGGCCGTTGGTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCAC 886896 Query 72300 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 72359 || || ||||| ||| || ||||| | ||||| | || | ||| || || ||||| Sbjct 886897 GCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCC 886956 Query 72360 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 72419 ||| || || || ||| ||||| || || || ||||| |||| || | || | || Sbjct 886957 CTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGT 887016 Query 72420 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 72479 || || || || | || || || ||||| || ||||| || || ||||| || ||||| Sbjct 887017 GCCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTA 887076 Query 72480 CGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACAT 72539 || || || || | || || || ||| || || || || | ||| | ||| | ||| Sbjct 887077 GGTTTCGATGGCCGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCAT 887136 Query 72540 ATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGT 72599 ||||| || | || | | ||| || || |||| || |||||| |||| || Sbjct 887137 GTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGT 887196 Query 72600 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTT 72659 || || || || ||||||| ||||| || || ||||| || || |||| || || Sbjct 887197 CTTGAAGCCGAAGAAGTTGTACGAAAAATCGCGGTCGTAGATGATGGCCGAGTTCAGGCG 887256 Query 72660 ATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCC 72718 || | | | || || |||| || | ||| || | || || || || || Sbjct 887257 GTCTCTGTTCTGCAGGACGATGTCCAGCGT-CTCCTTGGAGACCATGGGGGAGTGGCACC 887315 Query 72719 CATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 72778 ||| || || || |||||| | | ||||||||||| || || || | || || | Sbjct 887316 TGTTTAAGGGGTTGACGTAGTTGTACAGGTCCTCCATCACCTCGCTGAACACCTTCTTGG 887375 Query 72779 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTT 72838 | || ||||| || || || ||||| || | || || || ||||| || || || || | Sbjct 887376 TCTCTTTGTGCAGGTTGGAGACGGCAATCCGCGCAGCCAGGATGGCGTAGTCGGGGTGCT 887435 Query 72839 GTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTC 72898 || || ||||| | || || || ||||| ||||||| || ||||| || || | Sbjct 887436 TGGTGGTCAGGGTGGCGGAGATCTCCGCCGCCAGCGTGTCCAGCTCCACCGTGGTGACCC 887495 Query 72899 CATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGT 72958 | | || | || ||||| |||||||| | || | | || || | | |||| || Sbjct 887496 CGCTGTACAGACCCTGGATCACCTTCATGGTGATCTGAGCCGGGTCCACAAAGTCAGCGT 887555 Query 72959 TTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCAAACATAAC 73010 | | ||| || || | || || || || |||||||| || ||||| || Sbjct 887556 TCAGGCCGTAGCACAGCTTCTGGATGCGGGAGGTGATTTTGTCGAACATGAC 887607 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| ||||| || ||||| || || |||||| ||| | || || || ||||| || | Sbjct 885373 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 885432 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 |||| ||||| || || ||||||||||| || | ||| || ||||| || |||| ||||| Sbjct 885433 TCATAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGATGACCGTCT 885492 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | || ||||| | || || || | |||| | ||| | ||||| Sbjct 885493 TCTGGGAGATCTCCCACACCGTCTTGTACAGCTGCTTCACATCGTTTGGAA 885543 >seq14703 Length=1421099 Score = 111 bits (122), Expect = 2e-19 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| || ||||| ||||| || || |||||| ||| | || || || ||||| || | Sbjct 454816 TCCAGCCATAAAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 454757 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 | | |||||| || |||||||||||||| || | |||||| ||||| || | || |||| Sbjct 454756 TGAGCGACTGGCTCTGATCGATGAAGGCGCCGCGGTCTGCTGCCATCTTGAGGACGGTCT 454697 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 71036 | || | |||||||| | ||||||||| | |||| | ||| || || Sbjct 454696 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCAGATCGTCAGG 454648 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||||||||||||||| || || ||||| | ||| | || || || |||| || ||| Sbjct 453012 ACTCGTTTCATAAAGAGGTCTGGTATCCACAAAGCAAAGAACAGGTCCCTGGCCCTCTGC 452953 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| || || || ||||| || | || ||||| | | || ||| ||||||||||| Sbjct 452952 TCCTCTTTGCCCGTGTTCTTCTTCAACTCCAGGAAGTCAAAAACATCGGAATGCCACGGC 452893 Query 72142 TCCAAGTA 72149 |||| ||| Sbjct 452892 TCCAGGTA 452885 >seq7053 Length=111041 Score = 96.9 bits (106), Expect = 5e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| || || | |||||||| || || || |||||||| ||||| ||||| | Sbjct 46969 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 46910 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || | ||||| || || || ||||||||||| || || || ||||||| Sbjct 46909 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 46850 Query 42207 C 42207 | Sbjct 46849 C 46849 Score = 96.9 bits (106), Expect = 5e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| || || | |||||||| || || || |||||||| ||||| ||||| | Sbjct 51642 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 51701 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || | ||||| || || || ||||||||||| || || || ||||||| Sbjct 51702 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 51761 Query 42207 C 42207 | Sbjct 51762 C 51762 Score = 96.9 bits (106), Expect = 5e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| || || | |||||||| || || || |||||||| ||||| ||||| | Sbjct 60563 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 60622 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || | ||||| || || || ||||||||||| || || || ||||||| Sbjct 60623 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 60682 Query 42207 C 42207 | Sbjct 60683 C 60683 >seq3173 Length=1876 Score = 96.9 bits (106), Expect = 5e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| || || | |||||||| || || || |||||||| ||||| ||||| | Sbjct 348 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 407 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| || || | ||||| || || || ||||||||||| || || || ||||||| Sbjct 408 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 467 Query 42207 C 42207 | Sbjct 468 C 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670922984117480