Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq14537 190 3e-43 >seq14537 Length=2063196 Score = 190 bits (210), Expect = 3e-43 Identities = 360/528 (68%), Gaps = 24/528 (5%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || |||||| || ||| ||||| ||||| ||||| ||| | ||||| | | |||| Sbjct 886851 ACCAACGGCCACTCCAACGGCCTGGTGCCCATGCTGAGAGTTTACAACAACACGGCACGC 886792 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||| || || || ||||| ||||| | ||| | ||| |||| || ||| Sbjct 886791 TACGTGGACCAGGGAGGGAACAAGCGGCCCGGCGCCTTCGCCATGTACCTGGAGCCCTGG 886732 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||| ||||| |||||||| | ||| || || ||| | || || ||| || Sbjct 886731 CACTTCGACGTCTTTGACTTCCTGGAGCTGAAGAAGAACACGGGGAAGGAGGAGCAGAGA 886672 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------C 97040 ||||||||| |||| || || |||||| | || || |||||||||||| | || | Sbjct 886671 GCCAGGGACCTGTTCTACGCGCTCTGGATCCCCGACTTGTTCATGAAGAGGGTGGAGAGC 886612 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 ||| | | ||||| || ||||| || ||| | ||||| || ||| ||| Sbjct 886611 AACCAGG------ACTGGTCTCTGATGTGTCCGGACGAATGCCCCGGCTTGAACGAGTGC 886558 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAG---TACACGGCCTACGAGCAAGAGGGCCGATACGTG 97157 ||||| || ||||||||| ||| ||||| |||||||| | |||||||| ||| Sbjct 886557 TGGGGGGAGGAGTTTGAG---AAGCTCTACACCTCCTACGAGAAGGAGGGCCG---CGTC 886504 Query 97158 AGACGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACT 97214 | || || | | || | | ||||| | |||||| | | | ||| || || Sbjct 886503 AAGCGCGTGGTGAAGGCCCAGCAGGTGTGGCACGCCATCATCGAGTCCCAGACGGAAACC 886444 Query 97215 GGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTG 97274 || || |||||||| |||||||| || || || | || |||||||| | || || Sbjct 886443 GGCACCCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTG 886384 Query 97275 GGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCC 97322 ||||||||||| || ||| ||||||||||| || || || ||| || Sbjct 886383 GGCACCATCAAAAGCAGCAACCTGTGCACGGAGATCGTGGAATACACC 886336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740820458515480