Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_004831.2 Length=43769 Score E Sequences producing significant alignments: (Bits) Value seq24638 95.1 3e-15 seq24571 95.1 3e-15 seq24528 95.1 3e-15 seq24247 95.1 3e-15 seq23822 95.1 3e-15 seq22356 95.1 3e-15 seq21436 95.1 3e-15 seq21216 95.1 3e-15 seq20677 95.1 3e-15 seq20233 95.1 3e-15 seq19913 95.1 3e-15 seq19448 95.1 3e-15 seq19352 95.1 3e-15 seq19178 95.1 3e-15 seq19049 95.1 3e-15 seq18779 95.1 3e-15 seq17862 95.1 3e-15 seq17790 95.1 3e-15 seq17513 95.1 3e-15 seq16549 95.1 3e-15 seq23248 89.7 1e-13 seq21851 89.7 1e-13 seq20551 89.7 1e-13 seq17497 89.7 1e-13 seq24796 87.8 5e-13 seq17274 84.2 6e-12 >seq24638 Length=2856 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2811 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 2760 >seq24571 Length=1128 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1064 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 1013 >seq24528 Length=839 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 64 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 115 >seq24247 Length=833 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 65 >seq23822 Length=1107 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 90 >seq22356 Length=838 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 751 >seq21436 Length=803 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 69 >seq21216 Length=662 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 52 >seq20677 Length=768 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 698 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 647 >seq20233 Length=693 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 662 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 611 >seq19913 Length=837 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 789 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 738 >seq19448 Length=783 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 69 >seq19352 Length=890 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 137 >seq19178 Length=1597 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1551 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 1500 >seq19049 Length=867 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 796 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 745 >seq18779 Length=771 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 718 >seq17862 Length=775 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 773 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 722 >seq17790 Length=668 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 75 >seq17513 Length=879 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 820 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 769 >seq16549 Length=1478 Score = 95.1 bits (104), Expect = 3e-15 Identities = 52/52 (100%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 62 >seq23248 Length=1075 Score = 89.7 bits (98), Expect = 1e-13 Identities = 49/49 (100%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 39861 TAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1073 TAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 1025 >seq21851 Length=679 Score = 89.7 bits (98), Expect = 1e-13 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 663 CGTTAGAACGCGGCTACAATTAATACATACCCTTATGTATCATACACATACG 612 >seq20551 Length=558 Score = 89.7 bits (98), Expect = 1e-13 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 123 CGTTAGAACGCGGCTACAATTAATACATGACCTTATGTATCATACACATACG 174 >seq17497 Length=745 Score = 89.7 bits (98), Expect = 1e-13 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 39858 CGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 ||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5 CGTTAGAACGCGGCTACAATTAATACATAACGTTATGTATCATACACATACG 56 >seq24796 Length=630 Score = 87.8 bits (96), Expect = 5e-13 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 39854 TTGTCGTTAGAACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 485 TTGACGTTAGAACGCGGTTACAATTAATACATAACGTTATGTATCATACACATACG 430 >seq17274 Length=725 Score = 84.2 bits (92), Expect = 6e-12 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 39864 AACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 39909 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 725 AACGCGGCTACAATTAATACATAACCTTATGTATCATACACATACG 680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139896370995606