Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq14537 338 8e-88 seq7053 105 8e-18 seq3173 105 8e-18 seq14703 102 1e-16 seq14196 84.2 3e-11 >seq14537 Length=2063196 Score = 338 bits (374), Expect = 8e-88 Identities = 1039/1599 (65%), Gaps = 11/1599 (1%) Strand=Plus/Plus Query 62613 CAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGT 62672 || || ||||| | || |||| || ||||| |||||||||| | || || || Sbjct 886013 CAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGA 886072 Query 62673 GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACA 62732 || || |||| || || || || | ||| || || |||||||| | || || || Sbjct 886073 GCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACG 886132 Query 62733 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 62792 || || ||||| || | || | | | || ||| || || || || | || || || Sbjct 886133 CCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTCGGGCACCGGGTAGTAG 886192 Query 62793 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTG 62852 || || || || || || || || |||||||| | || ||| ||| | ||| ||| Sbjct 886193 TTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACGGCGGCCAGCTTG 886252 Query 62853 AGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAAGGCAACAGATGCCAGATTA 62909 | || || || | || | || ||||||| | || | || ||||| || Sbjct 886253 TGGAAGTCGAAGGTGCACTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGGTTG 886312 Query 62910 CAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACA 62968 || ||||| ||||| | || | | |||| | ||||| ||||| || || || | Sbjct 886313 CAGACGGCCACCTCGTC-GCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCT 886371 Query 62969 CTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 63028 ||||| || || | || || || || ||||| |||| || || || || || || || Sbjct 886372 TTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCAT 886431 Query 63029 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTT 63088 | | || || || ||||| |||| || || || || || | ||| || | ||||| Sbjct 886432 GTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGGGCCTT 886491 Query 63089 TATTATAGATTTGTATCTCCTTTCTCTTTCGTATA--GTGTATACAATCGTTCGAACTCG 63146 | | ||| | | || | ||||| ||||| | || || ||||| Sbjct 886492 CACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTC--TCAAACTCC 886549 Query 63147 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63206 || ||||| | || ||| || || ||||| ||||||||||||| ||||| || | Sbjct 886550 TCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTGG 886609 Query 63207 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63266 | || ||| | ||||| || | || || ||||| || || || || || ||| Sbjct 886610 TTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCTG 886669 Query 63267 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63326 | ||| || ||||| || || || ||||| || || || ||||| | | | || | Sbjct 886670 GCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAAG 886729 Query 63327 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63386 ||||| || |||| ||| ||||| | | || ||||| ||||| |||||||| || | | Sbjct 886730 TGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACG 886789 Query 63387 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63446 || | || ||||| || |||||||||| ||| || | | ||||| || || ||| Sbjct 886790 TAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTTG 886849 Query 63447 GTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63506 || |||| ||| || || || |||| || || || | | | || || ||||| Sbjct 886850 GTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCCG 886909 Query 63507 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCA 63566 ||| || ||||| | ||||| | || | |||||| || || ||||| ||||| || Sbjct 886910 GCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCG 886969 Query 63567 TCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 63626 || ||||| || || || ||||| |||| || | || | || || || || || Sbjct 886970 TCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAAG 887029 Query 63627 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63686 | || || || ||||| || ||||| || || || || || ||||| || || || || Sbjct 887030 AGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTTTCGATGGCC 887089 Query 63687 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63746 | ||| || || ||| || || || || | ||| | ||| | ||||||||| || | Sbjct 887090 GCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGCCGC 887149 Query 63747 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63806 || | | ||| ||| || |||| || |||||| |||| || || || || || Sbjct 887150 TCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAG 887209 Query 63807 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 63866 ||||||| ||||| || || ||||| || || ||||||| || || | | | Sbjct 887210 AAGTTGTACGAAAAATCGCGGTCGTAGATGATGGCCGAGTTCAGGCGGTCTCTGTTCTGC 887269 Query 63867 TTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 63925 || || |||| || | ||| || | || || || || || ||| || || Sbjct 887270 AGGACGATGTCCAGCGT-CTCCTTGGAGACCATGGGGGAGTGGCACCTGTTTAAGGGGTT 887328 Query 63926 AACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAG 63985 || |||||| | | ||||||||||| || || || | || || || || ||||| || Sbjct 887329 GACGTAGTTGTACAGGTCCTCCATCACCTCGCTGAACACCTTCTTGGTCTCTTTGTGCAG 887388 Query 63986 ATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT 64045 || || ||||| || | || || || ||||| || || || || | || || || Sbjct 887389 GTTGGAGACGGCAATCCGCGCAGCCAGGATGGCGTAGTCGGGGTGCTTGGTGGTCAGGGT 887448 Query 64046 GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCC 64105 ||| | || || || ||||| ||||||| || ||||| || || || | || | || Sbjct 887449 GGCGGAGATCTCCGCCGCCAGCGTGTCCAGCTCCACCGTGGTGACCCCGCTGTACAGACC 887508 Query 64106 TTGAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACA 64165 || || |||||||| | || | | || || | | || | ||| | ||| || || Sbjct 887509 CTGGATCACCTTCATGGTGATCTGAGCCGGGTCCACAAAGTCAGCGTTCAGGCCGTAGCA 887568 Query 64166 TAATTTTCTAATACGAGACGTGATTTTATCAAACATGAC 64204 | || || || || |||||||| || |||||||| Sbjct 887569 CAGCTTCTGGATGCGGGAGGTGATTTTGTCGAACATGAC 887607 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||| || ||||| || || |||||| || | || ||||| || ||||| | Sbjct 885373 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 885432 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||||||| || || || ||||||||||| || | ||| || ||||| || |||| ||||| Sbjct 885433 TCATAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGATGACCGTCT 885492 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | || ||||| | || || || | |||| | ||| | ||||| Sbjct 885493 TCTGGGAGATCTCCCACACCGTCTTGTACAGCTGCTTCACATCGTTTGGAA 885543 >seq7053 Length=111041 Score = 105 bits (116), Expect = 8e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| ||||| | Sbjct 46969 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 46910 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || |||| || || || || || ||||||||||| || || || ||||||| Sbjct 46909 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 46850 Query 33446 C 33446 | Sbjct 46849 C 46849 Score = 105 bits (116), Expect = 8e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| ||||| | Sbjct 51642 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 51701 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || |||| || || || || || ||||||||||| || || || ||||||| Sbjct 51702 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 51761 Query 33446 C 33446 | Sbjct 51762 C 51762 Score = 105 bits (116), Expect = 8e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| ||||| | Sbjct 60563 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 60622 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || |||| || || || || || ||||||||||| || || || ||||||| Sbjct 60623 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 60682 Query 33446 C 33446 | Sbjct 60683 C 60683 >seq3173 Length=1876 Score = 105 bits (116), Expect = 8e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| || || || |||||||| || || || |||||||| ||||| ||||| | Sbjct 348 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 407 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || |||| || || || || || ||||||||||| || || || ||||||| Sbjct 408 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGG 467 Query 33446 C 33446 | Sbjct 468 C 468 >seq14703 Length=1421099 Score = 102 bits (112), Expect = 1e-16 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| || ||||| ||||| || || |||||| || | || ||||| || ||||| | Sbjct 454816 TCCAGCCATAAAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 454757 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 | | || || || |||||||||||||| || | |||||| ||||| || | || |||| Sbjct 454756 TGAGCGACTGGCTCTGATCGATGAAGGCGCCGCGGTCTGCTGCCATCTTGAGGACGGTCT 454697 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 62230 | || | |||||||| | ||||||||| | |||| | ||| || || Sbjct 454696 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCAGATCGTCAGG 454648 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 63215 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63274 |||||||||||||||||| || || ||||| | ||| | || || || |||| || || Sbjct 453013 CACTCGTTTCATAAAGAGGTCTGGTATCCACAAAGCAAAGAACAGGTCCCTGGCCCTCTG 452954 Query 63275 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334 ||||| || || || ||||| || | || ||||| | | || ||| ||||||||||| Sbjct 452953 CTCCTCTTTGCCCGTGTTCTTCTTCAACTCCAGGAAGTCAAAAACATCGGAATGCCACGG 452894 Query 63335 TTCCAAGTATATGGCCATAACTCCAGG 63361 |||| ||| | || | ||||||| Sbjct 452893 CTCCAGGTACACAGCGAAGGCTCCAGG 452867 >seq14196 Length=26487 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 ||||||| || || || || ||||| ||| |||| || || ||||| || || | || | Sbjct 19533 CCTCGTCCCTGCTGATCAGCTCGTTTGAATACGTCAGGCCTGGCATGAGTCCTCTTTTCT 19474 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| | ||||||||||| || || || |||||||| || || || || ||||| | Sbjct 19473 TCAGCCAGTAGATGGAAGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACCGCCGCAAATG 19414 Query 33446 C 33446 | Sbjct 19413 C 19413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622746509772680