Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq14537 347 1e-90 seq14703 120 3e-22 seq14557 114 1e-20 seq18908 84.2 2e-11 >seq14537 Length=2063196 Score = 347 bits (384), Expect = 1e-90 Identities = 999/1512 (66%), Gaps = 46/1512 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||| ||| ||||| || | || ||| | ||| || | ||| ||| ||| Sbjct 885731 TTGACGATCTGGAACTCCCCCGACAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCC 885790 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || | |||||||| ||||||||||| || ||||| | |||||||||||| |||| Sbjct 885791 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATGGGGGCCAGG 885850 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || | || ||||||| ||| ||||| ||| ||| ||||| Sbjct 885851 AGCAGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCTCCTTCAGCTGCTGCCAGTCCCAC 885910 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 ||| || ||| || |||||||||||||||| | | ||||| |||| ||||| | Sbjct 885911 AGCTCGGTGGGCGTCTTCCCCCACATGTCGTACTGGAGGACGCCCTTGCTGACGGGGGAG 885970 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTCCAGAG 145355 || | || ||| |||| || | | || |||| ||| || |||||||| | Sbjct 885971 CCCTCGTAGCTCTCGTAGGGGCCC--AGCTCGGCGGCCAGCTGGCAGCTGGCCTCCAGGG 886028 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | || | || || |||||| || || |||| |||||| || || ||||||| Sbjct 886029 CCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGAGCCTCGGGGCTCTCGA 886088 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 |||| ||||| || | || || || || |||||||| | || | |||||||||| Sbjct 886089 ACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACGCCGATCCCGATGGGCC 886148 Query 145476 GATGTTTCATGTTG-----CTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGAT 145530 | || | ||||| ||| ||||| || | ||| | | ||| |||||| Sbjct 886149 GGTGGCGCCTGTTGGAGCGCTCGGCCTCGGGCACCGGGTAGTAGTT-GAT----GTCGAT 886203 Query 145531 AATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA-CTTTTCAAAGTCAA 145589 || || |||| ||||| || || ||||| || | | || || | ||| | ||||| | Sbjct 886204 GATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACG-GCGGCCAGCTTGTGGAAGTCGA 886262 Query 145590 ACCGAGC-CTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACT 145648 | | || |||| ||| ||| | |||| ||||| || |||| || || || Sbjct 886263 AG-GTGCACTCGGGGGTGACGT-ACA--TGTTGAGCGCGATGGAGGCCAGGTTGCAGACG 886318 Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708 ||| ||| ||| | | |||||| |||||||| | ||||| ||||| | ||||||| Sbjct 886319 GCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCTTTTGATG 886378 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 || ||||| || ||||| || || ||||||||||| ||||| ||||||||||||||||| Sbjct 886379 GTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGG 886438 Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGC---GCACGCACC 145825 ||| || ||| ||| | || |||| | |||| | ||||| || |||| Sbjct 886439 GTGCCGGTTTCCGTCTGGGACT---CGATGATGGCGTGCCACACCTGCTGGGCCTTCACC 886495 Query 145826 TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885 ||| | ||||||||| | ||||| ||||||||| ||||||| | || Sbjct 886496 ACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTCTCAAACTCCTCCCCC 886555 Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945 |||| ||| || |||||| || | || ||||||||||| ||||| | |||| Sbjct 886556 CAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTGGTTGCTC 886615 Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGC--GCGCTT 146003 | || | || ||| ||||| || || | ||| |||||||| | || ||| | || || Sbjct 886616 TCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCTGGCTCTC 886675 Query 146004 TGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCC 146063 ||| ||||| ||| |||| ||||| | || | | ||| ||| ||||| Sbjct 886676 TGC--TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAAGTGCC 886733 Query 146064 ACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGAC 146120 | || || | || | ||||| ||| || || ||| || ||||||||||||| | Sbjct 886734 AGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACGTAGC 886793 Query 146121 GTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAG 146180 || || ||||||| | || | || ||||||| | | |||| ||| |||||| || Sbjct 886794 GTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTTGGTGC 886853 Query 146181 AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGT 146240 | || | || || || | ||| || |||||||| || ||| | Sbjct 886854 CGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCCGGCCG 886913 Query 146241 ACTTGGATAT-AGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG--C 146297 ||||||| || ||| ||||| | |||||| ||||| ||||| || ||||| ||| | Sbjct 886914 ACTTGGAGATGAGC-GCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCGTCC 886972 Query 146298 TTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG--CGTCCCCGCCGAGAA 146355 ||| ||| | ||||| ||||| | ||| ||||| | ||| || || || ||| Sbjct 886973 TTC--ATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGC--CGGTTGGTGCCTGCGTTGAA 887028 Query 146356 CAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414 | ||| || ||||| || || || || || | || || || |||||||| | Sbjct 887029 GAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCG-ACAGCAGGTTGTAGGTTTCGATGG 887087 Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474 | | | ||||||| || ||||| | | ||| | ||| |||||||| || |||| Sbjct 887088 CCGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGCC 887147 Query 146475 GCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTATCCGA 146534 |||| ||||||| || ||||| | || ||| | ||||||||| ||| | |||| Sbjct 887148 GCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGA 887207 Query 146535 AAAATTTGTACG 146546 | || ||||||| Sbjct 887208 AGAAGTTGTACG 887219 >seq14703 Length=1421099 Score = 120 bits (132), Expect = 3e-22 Identities = 106/132 (80%), Gaps = 3/132 (2%) Strand=Plus/Minus Query 145652 GTCTCCTCGGCGTCGCTG---TATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708 ||| ||||| | | |||| |||| ||||||||| | ||||| ||||| ||| ||||| Sbjct 453458 GTCACCTCGTCCTTGCTGGTGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGATG 453399 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 || ||||| || ||||| || || ||||||||||| ||||||||||||||||||||||| Sbjct 453398 GTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGC 453339 Query 145769 CCGCCAGTCTCC 145780 ||| || ||| Sbjct 453338 GTGCCTGTTTCC 453327 >seq14557 Length=1650391 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| ||||| || | || | ||| |||||||| || |||||||| ||| | Sbjct 90826 CCACCCCTCAATCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 90885 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||||||||| || |||| | | |||||| || || || Sbjct 90886 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 90945 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||| | | ||| | || ||| ||| ||| | Sbjct 90946 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 91005 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | |||||| || || || || || ||||| ||||||||| || Sbjct 91006 TCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCT 91056 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || |||||| || | || | ||| ||||| || || |||||||| ||| Sbjct 91053 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 91112 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || ||||||||||| || |||| | | |||||| || || || Sbjct 91113 CAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 91172 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | ||| | | || ||| ||| | Sbjct 91173 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGTTGTCACTGGGCTCCAC 91232 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 |||| ||| | |||||| || || || || || ||||| ||||||||| || Sbjct 91233 CTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCT 91284 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || |||||| || | || | ||| ||||| || || |||||||| ||| Sbjct 91281 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 91340 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || ||||||||||| || |||| | | |||||| || || || Sbjct 91341 CAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 91400 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | ||| | || ||| ||| ||| | Sbjct 91401 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 91460 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | |||||| || || || || || || || ||||||||| Sbjct 91461 CTCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 91509 >seq18908 Length=594 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101 |||| || || |||||||| ||| || |||||| || || ||||||||||| || Sbjct 567 ACTCTTTCTGCATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAA 508 Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161 |||| | | |||||| || || || || ||||| ||||| ||| || ||| | | Sbjct 507 AGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGT 448 Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221 ||| | || ||| ||| ||| | || | || | |||||| || || || || || | Sbjct 447 TCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGA 388 Query 131222 CGAAAATCTGCATG 131235 | || ||||||||| Sbjct 387 CAAAGATCTGCATG 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471860735176320