Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq7434 118 7e-22 seq327 118 7e-22 seq326 118 7e-22 seq43 118 7e-22 seq41 118 7e-22 seq14728 113 3e-20 seq4298 113 3e-20 seq4296 109 4e-19 seq4971 89.7 3e-13 seq2452 89.7 3e-13 seq1087 89.7 3e-13 >seq7434 Length=27533 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| || |||| ||||| || |||||||| Sbjct 10325 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGACGGTAGGTAGGGACAGTGGGAATCTCGT 10266 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 10265 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 10231 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 7485 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 7426 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||| Sbjct 7425 GCCGGTGTTTAGCCTTA 7409 >seq327 Length=1149 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| || |||| ||||| || |||||||| Sbjct 752 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGACGGTAGGTAGGGACAGTGGGAATCTCGT 811 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 812 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 846 >seq326 Length=1217 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| || |||| ||||| || |||||||| Sbjct 408 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGACGGTAGGTAGGGACAGTGGGAATCTCGT 349 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 348 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 314 >seq43 Length=1234 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| || |||| ||||| || |||||||| Sbjct 964 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGACGGTAGGTAGGGACAGTGGGAATCTCGT 1023 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 1024 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 1058 >seq41 Length=1165 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| || |||| ||||| || |||||||| Sbjct 335 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGACGGTAGGTAGGGACAGTGGGAATCTCGT 276 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 275 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 241 >seq14728 Length=514073 Score = 113 bits (124), Expect = 3e-20 Identities = 128/172 (74%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 ||||||| || | ||| || || ||||| ||||||||||| ||||||||| |||||| | Sbjct 289314 ACCCGACCAAGTTTTTTGGTTGTGAACTCGGCGCTCAGACCCAGTTTGATACCAAAAATG 289255 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | || | |||||| |||||||| || | | |||| |||||||| | ||||| || | Sbjct 289254 ACCGTTACATCGTCAACGGATCCCACGAGGCGAACAAGTTGCAGGACATGCTTGATGGGT 289195 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCT 6490 | || || |||||||||||| || || || ||||| || || || || Sbjct 289194 TCATCAAAAAATTTGTGCTGTGTGCCGAGTGTGACAACCCTGAAACTGATCT 289143 >seq4298 Length=1094 Score = 113 bits (124), Expect = 3e-20 Identities = 82/95 (86%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||| || || |||| ||||| || |||||||| Sbjct 839 AAGCCCGTTCCCTTGGCTGTGGTTTCCCTGGACGGTAGGTAGGGACAGTGGGAATCTCGT 898 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 899 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 933 >seq4296 Length=1205 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| || |||| ||||| || |||||||| Sbjct 801 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGACGGTAGGTAGGGACAGTGGGAATCTCGT 860 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||| ||||||||| ||||||| Sbjct 861 TCATCCATTCATGCGCGCCACTAATTACATGACGA 895 >seq4971 Length=1781 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 1215 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 1156 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||| Sbjct 1155 GCCGGTGTTTAGCCTTA 1139 >seq2452 Length=1661 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 492 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 551 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||| Sbjct 552 GCCGGTGTTTAGCCTTA 568 >seq1087 Length=1081 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| Sbjct 36 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTAAGGTACTTGTCGACTATCGGTCTCGT 95 Query 20007 GGTAATATTTAGCCTTA 20023 | | |||||||||| Sbjct 96 GCCGGTGTTTAGCCTTA 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334841990258363