Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq14537 333 3e-86 seq14703 98.7 1e-15 >seq14537 Length=2063196 Score = 333 bits (368), Expect = 3e-86 Identities = 1038/1599 (65%), Gaps = 11/1599 (1%) Strand=Plus/Plus Query 62468 CAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGC 62527 || || ||||| | || |||| || ||||| |||||||||| | || || || Sbjct 886013 CAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGA 886072 Query 62528 GCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACA 62587 || || |||| || || || || | ||| || || ||||| || | || || || Sbjct 886073 GCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACG 886132 Query 62588 CCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAA 62647 || || ||||| || | || | | | || ||| || || || || | || || || Sbjct 886133 CCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTCGGGCACCGGGTAGTAG 886192 Query 62648 TTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTG 62707 || || || || || || || || |||||||| | || ||| ||| | ||| ||| Sbjct 886193 TTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACGGCGGCCAGCTTG 886252 Query 62708 AGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAACAGATGCCAGATTA 62764 | || || || | || | || ||||||| | || | || ||||| || Sbjct 886253 TGGAAGTCGAAGGTGCACTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGGTTG 886312 Query 62765 CAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCAAAGATTACTACA 62823 || ||||| ||||| | || | | |||| | ||||| ||||| || || || | Sbjct 886313 CAGACGGCCACCTCGTC-GCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCT 886371 Query 62824 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 62883 |||||||| || | || || || || ||||| |||| || || || || || || || Sbjct 886372 TTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCAT 886431 Query 62884 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTT 62943 | | || || || ||||| |||| || || || || || | ||| || | ||||| Sbjct 886432 GTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGGGCCTT 886491 Query 62944 TATTATAGATTTGTATCTCTTTTCTCTTTCGTATA--GTGTATACAATCGTTCGAACTCG 63001 | | ||| | || | ||||| ||||| | || || ||||| Sbjct 886492 CACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTC--TCAAACTCC 886549 Query 63002 TCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63061 || ||||| | || || || || ||||| ||||||||||||| ||||| || | Sbjct 886550 TCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTGG 886609 Query 63062 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63121 | || ||| | ||||| || | || || ||||| || || || || || ||| Sbjct 886610 TTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCTG 886669 Query 63122 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 63181 | ||| || ||||| || || || ||||| || || || ||||| | | | || | Sbjct 886670 GCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAAG 886729 Query 63182 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63241 ||||| || |||| ||| ||||| | | || ||||| ||||| |||||||| || | | Sbjct 886730 TGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACG 886789 Query 63242 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 63301 || | || ||||| || |||||||||| ||| || | | || ||||| || ||| Sbjct 886790 TAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTTG 886849 Query 63302 GTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 63361 || || | ||| || || || |||| || || || | | | || || ||||| Sbjct 886850 GTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCCG 886909 Query 63362 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 63421 ||| || ||||| | ||||| | || | ||| || || |||||||| || || || Sbjct 886910 GCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCG 886969 Query 63422 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 63481 ||| ||||| || || || ||||| |||| || | || | || || || || || Sbjct 886970 TCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAAG 887029 Query 63482 AAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT 63541 | || || || ||||| || ||||| || || || || || ||||| || || || || Sbjct 887030 AGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTTTCGATGGCC 887089 Query 63542 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 63601 | ||| || || ||| || || || || | ||| | ||| | ||||||||| || | Sbjct 887090 GCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGCCGC 887149 Query 63602 TCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 63661 || | | ||| ||| || |||| || |||||| |||| || || || || || Sbjct 887150 TCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAG 887209 Query 63662 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTG 63721 ||||||| ||||| || || ||||| || || ||||||| || || | | | Sbjct 887210 AAGTTGTACGAAAAATCGCGGTCGTAGATGATGGCCGAGTTCAGGCGGTCTCTGTTCTGC 887269 Query 63722 TTAACTACATCCATGGTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATT 63780 || | |||| || | ||| || | || || | || || ||| || || Sbjct 887270 AGGACGATGTCCAGCGT-CTCCTTGGAGACCATGGGGGAGTGGCACCTGTTTAAGGGGTT 887328 Query 63781 GACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAG 63840 ||| |||||| | | ||||||||||| || || || | || || || |||||||| || Sbjct 887329 GACGTAGTTGTACAGGTCCTCCATCACCTCGCTGAACACCTTCTTGGTCTCTTTGTGCAG 887388 Query 63841 ATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT 63900 || || ||||| || | || || || ||||| || || || || | || || || Sbjct 887389 GTTGGAGACGGCAATCCGCGCAGCCAGGATGGCGTAGTCGGGGTGCTTGGTGGTCAGGGT 887448 Query 63901 GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCC 63960 ||| | || || || ||||| ||||||| || ||||| || || || | || | || Sbjct 887449 GGCGGAGATCTCCGCCGCCAGCGTGTCCAGCTCCACCGTGGTGACCCCGCTGTACAGACC 887508 Query 63961 TTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACA 64020 ||||| |||||||| | || | | || || | | |||| ||| | ||| || || Sbjct 887509 CTGGATCACCTTCATGGTGATCTGAGCCGGGTCCACAAAGTCAGCGTTCAGGCCGTAGCA 887568 Query 64021 TAATTTTCTAATACGAGATGTGATTTTATCAAACATGAC 64059 | || || || || |||||||| || |||||||| Sbjct 887569 CAGCTTCTGGATGCGGGAGGTGATTTTGTCGAACATGAC 887607 Score = 96.9 bits (106), Expect = 4e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || ||||| || || |||||| || | || ||||| || ||||| | Sbjct 885373 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 885432 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||||||| || || || ||||||||||| || | ||| || ||||| || || | ||||| Sbjct 885433 TCATAGACTGGCTCTGGTCGATGAAGGCGCCGCGGTCGGCCGCCATCTTGATGACCGTCT 885492 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | || ||||| | || || || | |||| | ||| | ||||| Sbjct 885493 TCTGGGAGATCTCCCACACCGTCTTGTACAGCTGCTTCACATCGTTTGGAA 885543 >seq14703 Length=1421099 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| || ||||| ||||| || || |||||| || | || ||||| || ||||| | Sbjct 454816 TCCAGCCATAAAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGTGGATGT 454757 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 | | || || || |||||||||||||| || | |||||| ||||| || | | |||| Sbjct 454756 TGAGCGACTGGCTCTGATCGATGAAGGCGCCGCGGTCTGCTGCCATCTTGAGGACGGTCT 454697 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 62085 | || | |||||||| | ||||||||| | |||| | ||| || || Sbjct 454696 TCTGGGAGATTTCCCACACAGTTTTATACAGCTGCTTCAGATCGTCAGG 454648 Score = 89.7 bits (98), Expect = 7e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 63070 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63129 |||||||||||||||||| || || ||||| | ||| | || || || |||| || || Sbjct 453013 CACTCGTTTCATAAAGAGGTCTGGTATCCACAAAGCAAAGAACAGGTCCCTGGCCCTCTG 452954 Query 63130 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 ||||| || || || ||||| || | || ||||| | | || ||| ||||||||||| Sbjct 452953 CTCCTCTTTGCCCGTGTTCTTCTTCAACTCCAGGAAGTCAAAAACATCGGAATGCCACGG 452894 Query 63190 TTCCAAGTATATGGCCATAACTCCAGG 63216 |||| ||| | || | ||||||| Sbjct 452893 CTCCAGGTACACAGCGAAGGCTCCAGG 452867 Score = 82.4 bits (90), Expect = 1e-10 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| || ||||||||||| ||||| || ||||| || | || || || | Sbjct 451655 CACTGAAGACTTTCTTGGTTTCTTTGTGCAGATTGGACACGGCGATCCGCGCAGCCAGGA 451596 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 |||| || || ||||||| || || ||| || || | || || ||||| ||||||| Sbjct 451595 TGGCGTAGTCGGGATGTTTGGTGGTGAGAGTAGCCGCCGTCTCTGCCGCCAGGGTGTCCA 451536 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCA 63974 || | || || || || | || | || ||||| ||||||| Sbjct 451535 GCTCCGCTGTGGTGACGCCGCTGTACAGACCCTGGATCACCTTCA 451491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633427867530800