Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq14537 107 2e-18 >seq14537 Length=2063196 Score = 107 bits (118), Expect = 2e-18 Identities = 450/699 (64%), Gaps = 11/699 (2%) Strand=Plus/Plus Query 129697 ATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCG 129756 || ||||||| ||||||||||| |||| || |||| || || || || | | Sbjct 886298 ATGGAGGCCAGGTTGCAGACGGCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGTG 886357 Query 129757 CACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCA 129816 |||| || || |||| |||||||||| | || || || || ||| ||||||| || Sbjct 886358 CACAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCG 886417 Query 129817 TCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTG-AA 129875 |||||||| | ||||||||| ||||| ||||| || | |||| |||| | || | Sbjct 886418 TCTTTGTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGG-CGTGCCA 886476 Query 129876 CAAGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACATTTCTCGTATGCCACATACAG 129935 || | | ||||| | | | | ||| |||||||| | || || Sbjct 886477 CACCTGCTGGGCCTTCACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAG 886536 Query 129936 TTGTTCAAA-TTCTGAGCCGTGTACGGTGTCGAGCAACGGCGATTCACGCGGACACATCA 129994 | ||||| | || || | || || ||| ||| |||| ||||||||||| Sbjct 886537 CTTCTCAAACTCCTCCCCCCAGCACTCGTTCAAGCCGGGGC-ATTCGTCCGGACACATCA 886595 Query 129995 AACTCCACATTCCATCCGCT-TCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCG 130053 | ||| | | ||| || || | ||||| ||||| ||||| | ||| || ||| Sbjct 886596 GAGACCA-GTCCTGGTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCG 886654 Query 130054 TACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAA 130113 || |||| || | ||| | ||||| ||| |||| ||||| || ||||| Sbjct 886655 TAGAACAGGTCCCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAG 886714 Query 130114 TCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG--- 130170 || | | |||| |||||| || || | || || || | ||||| ||| ||| Sbjct 886715 TCAAAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTC 886774 Query 130171 CCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCG 130230 || || ||||| |||| ||| | | |||||||| |||| || ||| | | ||| ||| Sbjct 886775 CCTCCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCG 886834 Query 130231 TTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTT 130290 |||| |||||| |||| | ||| |||| || || || | | ||| Sbjct 886835 TTGGAGTGGCCGTTGGTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCC 886894 Query 130291 AGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAAT 130349 | || ||||| ||| | | || || || | |||||| | || | ||||| || ||||| Sbjct 886895 ACGCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGCACT-GCTTGAGCGTGTCGTAAAT 886953 Query 130350 GCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACA 130388 ||| |||| ||||| || || ||| || ||||| || Sbjct 886954 GCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGCA 886992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419596159893745