Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq14537 762 0.0 seq7053 132 9e-26 seq3173 132 9e-26 seq14703 114 2e-20 seq14196 114 2e-20 >seq14537 Length=2063196 Score = 762 bits (844), Expect = 0.0 Identities = 1141/1603 (71%), Gaps = 48/1603 (3%) Strand=Plus/Plus Query 244003 CTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAA 244062 ||| || ||||| |||||| ||||||||||| | ||||| ||||||||||||||| Sbjct 885643 CTGGACGGAGCCGTTGTGGGCGATGAGCTGGTTCTTCATGTCCTCGTTCCACAGGCCC-- 885700 Query 244063 GCGCTCC---AGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCCGACAGCAC 244119 | |||| || ||| || |||||| ||| || | ||| ||||| ||||||||||| Sbjct 885701 -CTCTCCGTCAGGTCCTTGAGCAGGTGGGGGTTGACGATCTGGAACTCCCCCGACAGCAC 885759 Query 244120 GCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTG 244179 | |||| ||||| ||||||| || | ||||||| ||| |||||||||| ||||| Sbjct 885760 CCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTG 885819 Query 244180 CGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTG 244239 || ||| || || |||||||| | || ||||| ||||||||||||||||||| Sbjct 885820 GGCGGTGGAGGCGGTGGGCATGGGGGCCAGGAGCAGGCTGTTCCTCACGCCGTGCCGGGC 885879 Query 244240 GATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCC 244299 ||| | | |||| | ||||||||||| || || | || | || || || Sbjct 885880 GATCCTCTCCTTCAGCTGCTGCCAGTCCCACA-GCTCG-GTGGGCGTC----TTC---CC 885930 Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 ||||||||| |||| || | ||||||||||||||| |||||||||| || |||||| Sbjct 885931 CCACATGTCGTACTGGAGGACGCCCTTGCTGACGGGGGAGCCCTCGTAGCTCTCGTAGGG 885990 Query 244360 ACCGTCGCGCTG-GGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418 || || | | |||||||| ||||| | || ||||| ||||||||||||||||||| Sbjct 885991 GCCCA-GCTCGGCGGCCAGCTGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGA 886049 Query 244419 AGATCATCTTGTTCATGTCGCGG-GCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATG 244477 ||||| |||||| | || | |||| | || ||| ||| || ||| | ||| Sbjct 886050 AGATCTGGGTGTTCA-GCAGCTGAGCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATG 886108 Query 244478 AAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGC 244537 ||| |||| ||||| ||||| |||||||| |||||||| | ||| ||| ||||||||||| Sbjct 886109 AAGGCGTCCGCCAGCCCCTGGACGCCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGC 886168 Query 244538 ATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATC 244597 ||| |||||||| ||||| ||||| |||||| | |||||| ||||| | | | | Sbjct 886169 TCGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATGATCTTGTTCAGGTTTCTGACCACC 886228 Query 244598 ATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTG 244657 | | ||| |||||||| || |||||| | | | ||||| | || Sbjct 886229 ACCTTGGTCACGGCGGCCAGCTTGTGGAAGTCGAAGGTGCA------CTCGGGGGTG--- 886279 Query 244658 ATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAG 244717 || || |||||| |||| | |||||||||||||||||||||||| || | Sbjct 886280 ------ACGTACATGTTGAGCGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCGCTG 886333 Query 244718 TTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGG 244777 ||||||| | || ||||| ||||| ||||| |||| |||||||||||||||| ||| Sbjct 886334 CTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGC 886393 Query 244778 TGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGC 244837 || ||| ||| |||||||||||| |||||||||||| | || ||||| || | Sbjct 886394 TGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGGGTGCCGGTTTCCGTC 886453 Query 244838 TGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTG-CC 244896 |||| ||| || | || ||| | | | ||||| ||| | || | | | || Sbjct 886454 TGGGACTCGATGATGGCGTGCCACACCTGCTGGGCCTTCACCACGC-GCTTGACGCGGCC 886512 Query 244897 CTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC 244956 ||| ||||||| |||||| || ||| ||||| |||||| ||||| | ||| Sbjct 886513 CTCCTTCTCGTAGGAGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTTCAAGCC 886572 Query 244957 GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAA 245016 |||||| |||| ||||| ||| ||| || | | || ||||||| |||||| Sbjct 886573 GGGGCATTCGTCCGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAA 886632 Query 245017 GAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGT 245076 | ||||||||||||||| || | ||| |||||||||| |||||||| ||| || || Sbjct 886633 CAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCTGGCTCTCTGCTCCTCCTTCCCCGT 886692 Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136 ||||||| ||||||||| |||||||||||||||| |||||||||||||| ||| | || Sbjct 886693 GTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGC 886752 Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTCTCGAGCGCGTTGAAGA 245195 || |||||||||||||||||| |||||||||||||| | | | || | |||| | | Sbjct 886753 GAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACGTAGCGTGCCGTG-TTGTTGTAAA 886811 Query 245196 TGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCT 245255 | ||| | ||||| | |||||| ||||||||||||||||| |||||| ||| Sbjct 886812 CTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTTGGTGCCGGCGATGTAACTCCCCG 886871 Query 245256 TGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGC 245315 || | | || | ||||| || || ||| | || ||||| |||||||||||| |||| Sbjct 886872 TGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGC 886931 Query 245316 AGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGC 245375 | ||||| ||||| |||||||| |||||||| ||||||| ||||| |||| Sbjct 886932 ACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGC 886991 Query 245376 AGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAA 245435 || ||||||||| ||| | | ||| | |||||| || ||||| ||||||||| | Sbjct 886992 AGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTGA 887051 Query 245436 AGTAGCGGCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGG 245494 | | | || ||| || | ||| || | || |||||||||| || |||| Sbjct 887052 ACCA-CTTCTCCGACAGCAGGTTGTAGGTTTCGATGGCCGCGTCGATGTCGTTTTGGTGG 887110 Query 245495 ATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCT----CGGG 245550 || | || | |||||| || ||||||| ||| || | || | || || Sbjct 887111 ATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGC----CGCTCGGCCACTTTGCCGTT 887166 Query 245551 TCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAG 245593 ||| |||| |||||||||||| || |||||||| || ||| Sbjct 887167 GATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAG 887209 >seq7053 Length=111041 Score = 132 bits (146), Expect = 9e-26 Identities = 107/127 (84%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| |||||| ||||||| ||||| ||||||||||||||| |||| ||| ||||||||| Sbjct 46844 TGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCT 46903 Query 42766 GGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| || ||| | ||||||||| || |||||||| ||||| || |||||||| Sbjct 46904 GGCTGAAGAAGCGAGGCCT-GATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGA 46962 Query 42825 GACGAGG 42831 ||||||| Sbjct 46963 GACGAGG 46969 Score = 132 bits (146), Expect = 9e-26 Identities = 107/127 (84%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| |||||| ||||||| ||||| ||||||||||||||| |||| ||| ||||||||| Sbjct 51767 TGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCT 51708 Query 42766 GGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| || ||| | ||||||||| || |||||||| ||||| || |||||||| Sbjct 51707 GGCTGAAGAAGCGAGGCCT-GATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGA 51649 Query 42825 GACGAGG 42831 ||||||| Sbjct 51648 GACGAGG 51642 Score = 132 bits (146), Expect = 9e-26 Identities = 107/127 (84%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| |||||| ||||||| ||||| ||||||||||||||| |||| ||| ||||||||| Sbjct 60688 TGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCT 60629 Query 42766 GGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| || ||| | ||||||||| || |||||||| ||||| || |||||||| Sbjct 60628 GGCTGAAGAAGCGAGGCCT-GATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGA 60570 Query 42825 GACGAGG 42831 ||||||| Sbjct 60569 GACGAGG 60563 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 ||| |||||||| |||||||||||||| ||||||| ||||||||||| || |||||| | Sbjct 47589 CCCTTTCGACTTCATGGAGAACATCTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAGAG 47648 Query 43130 CGTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 47649 AGTGGGCGAGTACCAG 47664 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 ||| |||||||| |||||||||||||| ||||||| ||||||||||| || |||||| | Sbjct 51023 CCCTTTCGACTTCATGGAGAACATCTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAGAG 50964 Query 43130 CGTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 50963 AGTGGGCGAGTACCAG 50948 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 ||| |||||||| |||||||||||||| ||||||| ||||||||||| || |||||| | Sbjct 59946 CCCTTTCGACTTCATGGAGAACATCTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAGAG 59887 Query 43130 CGTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 59886 AGTGGGCGAGTACCAG 59871 >seq3173 Length=1876 Score = 132 bits (146), Expect = 9e-26 Identities = 107/127 (84%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| |||||| ||||||| ||||| ||||||||||||||| |||| ||| ||||||||| Sbjct 473 TGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCT 414 Query 42766 GGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| || ||| | ||||||||| || |||||||| ||||| || |||||||| Sbjct 413 GGCTGAAGAAGCGAGGCCT-GATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGA 355 Query 42825 GACGAGG 42831 ||||||| Sbjct 354 GACGAGG 348 >seq14703 Length=1421099 Score = 114 bits (126), Expect = 2e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155 ||||||||||||||| || || || | |||| ||||| ||||||| || | ||||| Sbjct 454377 CACCTGAAACTCTCCTGAAAGGACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAA 454318 Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215 | ||| |||| ||||| ||||| |||||| || || |||||||| | || |||||| Sbjct 454317 GGACTCGTTGTTCCCCAGGATCTGGGCCGTGGAGGCGGTGGGCATGGGAGCCAGCAGCAG 454258 Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAG 244248 |||||||| ||||| || || ||| |||||| Sbjct 454257 GCTGTTCCTGACGCCATGTCTGAGGACGCGGAG 454225 Score = 113 bits (124), Expect = 9e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 244701 CGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGA 244760 ||| |||||| ||| | ||||||| | || ||||| ||||| ||||| ||||| ||| Sbjct 453460 CGGTCACCTCGTCCTTGCTGGTGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGA 453401 Query 244761 TGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGG 244820 |||||||||||| ||| || ||| ||| ||||||||||||||||||||||||| | | Sbjct 453400 TGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACG 453341 Query 244821 GC 244822 || Sbjct 453340 GC 453339 >seq14196 Length=26487 Score = 114 bits (126), Expect = 2e-20 Identities = 109/137 (80%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||| ||||||| || ||| | || || ||||||||||||||||| ||| ||||||| Sbjct 19398 GGGGAGCGGCTGGTGGCATTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCT 19457 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 ||||||| |||||| ||| | | ||| || ||||| || || || | || ||||| || Sbjct 19458 TCCATCTACTGGCTGAAGAAAAGAGGACTC-ATGCCAGGCCTGACGTATTCAAACGAGCT 19516 Query 42815 CATCAGCAGGGACGAGG 42831 |||||||||||||||| Sbjct 19517 GATCAGCAGGGACGAGG 19533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944034969322480