Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq14557 120 7e-22 seq14609 84.2 5e-11 >seq14557 Length=1650391 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 90862 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 90921 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| ||| | || || ||||| || |||||||| || || |||||||| Sbjct 90922 ATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 90981 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || || || ||||| || || || || || ||||||||| Sbjct 90982 TCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACG 91041 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 91042 AAGATCTGCAT 91052 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 91090 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAG 91149 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| ||| | || || ||||| || |||||||| || || |||||||| Sbjct 91150 ATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTC 91209 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || || || | || || ||||| ||||| || || || || || ||||||||| Sbjct 91210 TCAATGTTGTCACTGGGCTCCACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACG 91269 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 91270 AAGATCTGCAT 91280 >seq14609 Length=591378 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| ||||||||||| || || || || ||||| || | ||||| | || || || Sbjct 431604 CCTTCCTTATCCTGGATCTTTGCCTTGACATTTTCGATCGTGTCGCTGGGCTCGACCTCA 431545 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||| |||| ||||| ||||| |||||||| Sbjct 431544 AGGGTGATGGTCTTCCCCGTCAACGTCTTCACGAAGATCTGCAT 431501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179264858579094