Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq14537 196 6e-45 seq14703 95.1 1e-14 seq7053 93.3 5e-14 seq3173 93.3 5e-14 >seq14537 Length=2063196 Score = 196 bits (216), Expect = 6e-45 Identities = 889/1391 (64%), Gaps = 44/1391 (3%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||| | | |||| ||||| |||| ||| |||||||||||| Sbjct 885770 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 885829 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || ||||||||||| |||| ||| |||||||| | | || | || | ||| Sbjct 885830 GCGGTGGGCATGGGGGCCAGGAGCAGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCTCC 885889 Query 114062 TTGAGGGCGTCCCAGTCGTA------GTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 114115 || || | |||||| | | || || |||| |||| ||||| || || Sbjct 885890 TTCAGCTGCTGCCAGTCCCACAGCTCGGTGGGC---GTCTTCCCC---CACATGTCGTAC 885943 Query 114116 TGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC 114175 ||||||| || | | | | || || ||||| | ||||||| |||||| | | Sbjct 885944 TGGAGGACGCCCTTGCTGACGGGGGAGCCCTCGTAGCTCTCGTAGGGGCCCAGCTCGGCG 886003 Query 114176 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 114235 |||| | | |||| ||||| ||||| |||| || || ||||| || || | | ||| Sbjct 886004 GCCAGCTGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTC 886063 Query 114236 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 114295 | || |||||| | || |||| | || | || || | ||||| || Sbjct 886064 AGCAGCTGAGCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGC 886123 Query 114296 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---C 114352 || ||||| |||| || || || || || | | | || || || ||| ||| | Sbjct 886124 CCCTGGACGCCGATCCCGATGGGCCGGTGGCGCCTGTTGGAG---CGCTCGGCCTCGGGC 886180 Query 114353 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 114412 || || || | || | ||||| | | | || || ||| || || ||||| || | Sbjct 886181 ACCGGGTAGTAGTTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACG 886240 Query 114413 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 114472 | ||||| | | | || || ||| ||| |||| ||| | || ||| Sbjct 886241 GCGGCCAGCTTGTGGAAGTCGAAGGTGCA---CTCGGGGGTGACGTACATGTTGAGCGCG 886297 Query 114473 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 114532 || || ||||| || || || | ||| || | ||||| || | || ||||| Sbjct 886298 ATGGAGGCCAGGTTGCAGACGGCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGTG 886357 Query 114533 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 114592 |||| || || || |||||||||| ||||| || || ||| |||| || || Sbjct 886358 CACAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCG 886417 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652 || ||||| |||||||| || || || || ||||| ||||||| || || || | ||| Sbjct 886418 TCTTTGTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCAC 886477 Query 114653 ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGG 114712 || | ||| ||| | ||| | || ||||||| |||||| |||||||| Sbjct 886478 ACCTGCTGGGCCTTCACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGC 886537 Query 114713 GCTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGCCTTA-TCTGGGCAGAAGA 114770 |||||||| || ||| | ||| | |||| || || || || || || | | Sbjct 886538 TTCTCAAACTCCTCCCCCCAGCACTCGTTCAAGCC--GGGGCATTCGTCCGGACACATCA 886595 Query 114771 GAGACCATTGACCACCCTCCTCAACACGCT--TCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||||||| | || | ||| ||| || ||||||| | ||| ||||||||||| || Sbjct 886596 GAGACCAGT--CCTGGTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGC 886653 Query 114829 TGAGAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 114887 |||| || |||| | | ||| || | ||||| || || || ||||| | Sbjct 886654 GTAGAACAGGTCCCTGGCTCTCTGCTCCTCCTTCCCCGTG-TTCTTCTTCAGCTCCAGGA 886712 Query 114888 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA- 114946 |||| | || || |||||| || |||||||||| |||| | || || Sbjct 886713 AGTCAAAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGT 886772 Query 114947 --CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATAC 115004 || |||||| || || | || ||| || | || | ||||| || | | | Sbjct 886773 TCCCTCCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGC 886832 Query 115005 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA--CATCATGGAT 115062 | | || ||||| || || || || | | |||||| || || | || Sbjct 886833 CGTTGGAGTGGCCGTTGGTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCT--GAC 886890 Query 115063 GTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTA 115122 | || || || ||||| ||| |||| ||||| ||||||||| | |||| || |||| Sbjct 886891 GGCCACGCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTA 886950 Query 115123 GATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCC- 115181 || || ||||| ||| |||| | || | ||||||||||| |||| || |||| Sbjct 886951 AATGCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCG 887010 Query 115182 -TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACAT 115239 |||||| || ||||||||||| || || | |||||| ||||| || | | |||| Sbjct 887011 GTTGGTG--CCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTGAAC-CACTTCTCCGACAG 887067 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | | |||||| || | | | ||| ||||| | ||| || |||| ||||||| Sbjct 887068 CAGGTTGTAGGTTTCGATGGCCGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCT 887127 Query 115300 CATAAACATGT 115310 ||| | ||||| Sbjct 887128 CATCAGCATGT 887138 >seq14703 Length=1421099 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/206 (72%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT--TGAACTCTTAATGGTG 114556 ||| ||||| ||||| |||| || ||||| |||| || || | ||| | ||||| Sbjct 453453 CTCGTCCTTGCTGGTGTATTCTACGATCTCCGTGCACAGGTTGCTGCA-TCTGA-TGGTG 453396 Query 114557 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616 |||| ||||| || || ||| |||| || || |||||||| |||||||| ||||| Sbjct 453395 CCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTG 453336 Query 114617 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGC--GGCTGGCACAGTGG 114674 || || ||||||||||||| || || || | || ||| | || ||| ||| | Sbjct 453335 CCTGTTTCCGTTTGGGACTCGATGATGGCGTACC--ACAGCTGCTGGGCCTTCACCACGC 453278 Query 114675 CGTTGGCTCGCCCCTCCTCCTCGTAC 114700 |||||||| ||||||| ||||||| Sbjct 453277 GTTTGGCTCGGCCCTCCTTCTCGTAC 453252 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| ||| | ||||| | ||| ||| |||| ||||| |||| ||| ||||| |||||| Sbjct 454343 TAGATGTTGCTGGTGTAGGCCTCGAAGGACTCGTTGTTCCCCAGGATCTGGGCCGTGGAG 454284 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 || ||||||||||| |||| || |||||||| Sbjct 454283 GCGGTGGGCATGGGAGCCAGCAGCAGGCTGTT 454252 >seq7053 Length=111041 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | ||| || || || |||||| ||| || ||||| || || ||||||| Sbjct 46969 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 46910 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||| || || ||| || ||||||||||||||||||||||| Sbjct 46909 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCAC 46861 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | ||| || || || |||||| ||| || ||||| || || ||||||| Sbjct 51642 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 51701 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||| || || ||| || ||||||||||||||||||||||| Sbjct 51702 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCAC 51750 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | ||| || || || |||||| ||| || ||||| || || ||||||| Sbjct 60563 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 60622 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||| || || ||| || ||||||||||||||||||||||| Sbjct 60623 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCAC 60671 >seq3173 Length=1876 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | ||| || || || |||||| ||| || ||||| || || ||||||| Sbjct 348 CCTCGTCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCT 407 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||| || || ||| || ||||||||||||||||||||||| Sbjct 408 TCAGCCAGAAGATGGCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCAC 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597161155070840