Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq14537 311 9e-80 seq14703 93.3 4e-14 >seq14537 Length=2063196 Score = 311 bits (344), Expect = 9e-80 Identities = 1294/2008 (64%), Gaps = 74/2008 (4%) Strand=Plus/Minus Query 93331 GTCATGTTCGACAAGATCACTACCAGGGTGCGCAAACTTTGCGAGGGTCTGGACTCTGAC 93390 |||||||||||||| ||||| || | | | || || ||| | || ||| || ||||| Sbjct 887607 GTCATGTTCGACAAAATCACCTCCCGCATCCAGAAGCTGTGCTACGGCCTGAACGCTGAC 887548 Query 93391 TTCGTGGATCCCGTCGAGGTCACCATGAGAGTGAATCAGGGAATATATGCCGGGGTCACA 93450 || ||||| || | || ||||||||| |||| ||||| | || ||||||||| Sbjct 887547 TTTGTGGACCCGGCTCAGATCACCATGAAGGTGATCCAGGGTCTGTACAGCGGGGTCACC 887488 Query 93451 ACTGTCGAGCTCGATCTTCTGGCCGCGGAGACTTGTGCCTTCATGAGTACGAATCACCCG 93510 || || ||||| || ||||| ||||||| | ||| | ||| || || ||||| Sbjct 887487 ACGGTGGAGCTGGACACGCTGGCGGCGGAGATCTCCGCCACCCTGACCACCAAGCACCCC 887428 Query 93511 GACTACTCCATTTTGGCTGCTCGAATCTGCC-TGAGCAACCTCTATAAAGAAACC--GAA 93567 |||||| |||| ||||||| || || |||| | |||||| | ||||| ||| ||| Sbjct 887427 GACTACGCCATCCTGGCTGCGCGGAT-TGCCGTCTCCAACCTGCACAAAGAGACCAAGAA 887369 Query 93568 TCT-TGCTACAAGACCCTTGTTCAAAAAATGCGAGAATACGTCAACCC-TGAGACT--TC 93623 | | | | || | | | | || | ||||||||||| | | || | Sbjct 887368 GGTGTTCAGCGAGGTGATGG---AGGACCTGTACAACTACGTCAACCCCTTAAACAGGTG 887312 Query 93624 CCAACACGCTCCCCTTGTCTCGGAGGAG---CTGGCCTCGGTCGTTGCCAACAACAGCAA 93680 ||| | | ||| | ||||| ||||| |||| | ||| | || | ||||| | Sbjct 887311 CCA---CTCCCCCATGGTCTCCAAGGAGACGCTGGACATCGTCCT-GC--AGAACAGAGA 887258 Query 93681 GGTCATCCAGGAGGCCCTGGACGAAGTATTGGAAAATT---ACGATTACTTTGCCTTCAA 93737 | | | |||| | | | | || || || | | ||| | |||||| Sbjct 887257 CCGCCTGAACTCGGCCATCATCTACGACCGCGATTTTTCGTACAACTTCTTCGGCTTCAA 887198 Query 93738 AACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCGCACCA 93797 || |||||| || ||||| || ||||| | |||| || ||||||| ||||| || Sbjct 887197 GACCCTGGAGCGCTCCTACCTGCTGAAGATCAACGGCAAAGTGGCCGAGCGGCCGCAGCA 887138 Query 93798 GCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTTGCGGGC 93857 |||||||| | ||| || |||| || ||| ||||||| ||| |||| | Sbjct 887137 CATGCTGATGAGGGTCTCCGTCGGCATCCACCAAAACGACAT--CGAC------GCGGCC 887086 Query 93858 TTTCAGAG-----ACATGCGG---GACAAGAGGTATACCATGGCCACCCCGACCCTGTTC 93909 | | | || ||| | || ||| ||| ||| ||| | || || || ||| Sbjct 887085 ATCGAAACCTACAACCTGCTGTCGGAGAAGTGGTTCACCCACGCCTCGCCCACGCTCTTC 887026 Query 93910 AACGCGGGGACC--CCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCG 93967 ||||| || ||| |||| || ||| |||| || |||||| || | | |||| || Sbjct 887025 AACGCAGGCACCAACCGG--CCGCAGCTGTCCAGCTGCTTCCTGCTGGCCATGAAGGACG 886968 Query 93968 ACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGG 94027 || |||| || |||| ||||| |||||| | || ||| |||||| || | || | Sbjct 886967 ACAGCATCGAGGGCATTTACGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGTCGGCCG 886908 Query 94028 GGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCA 94087 |||| ||||| | ||| | | | || |||| ||| |||||| ||| |||| Sbjct 886907 GGGGCATCGGCGTGGCCGTCAGCTGCATCCGAGCCACGGGGAGTTACATCGCCGGCACCA 886848 Query 94088 ATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACG 94147 | ||| |||||||||||| || || ||||| | || | ||||||| |||| ||||||| Sbjct 886847 ACGGCCACTCCAACGGCCTGGTGCCCATGCTGAGAGTTTACAACAACACGGCACGCTACG 886788 Query 94148 TGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACG 94207 |||||||||| || | | || || | ||||| | || || |||||||||||| Sbjct 886787 TGGACCAGGGAGGGAACAAGCGGCCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCACT 886728 Query 94208 CGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCA 94267 ||||| | ||| | || ||| |||||| || || || | |||| |||| Sbjct 886727 TCGACGTCTTTGACTTCCTGGAGCTGAAGAAGAACACGGGGAAGGAGGAGCAGAGAGCCA 886668 Query 94268 GAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACT 94327 | ||||| |||||||| |||||| | || ||| | || ||||| | || |||| ||| Sbjct 886667 GGGACCTGTTCTACGCGCTCTGGATCCCCGACTTGTTCATGAAGAGGGTGGAGAGCAACC 886608 Query 94328 CCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGC 94387 | |||| ||| | ||||| | ||||| ||||| || ||| || || | Sbjct 886607 AGGACTGGTCTCTGATGTGTCCGGACGAATGCCCCGGCTTGAACGAGTGCTGGGGGGAGG 886548 Query 94388 GTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGGATG 94447 ||||| | | || | ||||| | ||||| | || | || || | | Sbjct 886547 AGTTTGAGAAGCTCTACACCTCCTACGAGAAGGAGGGCCGCGTCAAGCGCGTGGTGAAGG 886488 Query 94448 CTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCT 94507 | | || ||||| | ||| | || ||| ||| || || || || ||||| Sbjct 886487 CCCAGCAGGTGTGGCACGCCATCATCGAGTCCCAGACGGAAACCGGCACCCCGTACATGC 886428 Query 94508 TGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCT 94567 | | ||| ||| | |||| ||| |||||||||| |||| || ||||| ||| Sbjct 886427 TCTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAAAGCA 886368 Query 94568 CGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACC 94627 || |||||||| ||||| || || || || |||||| | || || || |||| Sbjct 886367 GCAACCTGTGCACGGAGATCGTGGAATACACCAGCAGCGACGAGGTGGCCGTCTGCAACC 886308 Query 94628 TGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTCTACTGCTTCGTTCG 94687 ||| ||||||| | || || | || || | || | | ||| | |||| Sbjct 886307 TGGCCTCCATC--GCGCTCAACAT--GTACGTCACCCC-------CGAGTGC-ACCTTCG 886260 Query 94688 ATCTGGAGGAGCTTGTGAACTTCGCGGGAAG--GATGGTCTTGAACCTGAACAGGGTAAT 94745 | | | |||| | | | | ||| | ||||| |||||||||| | | || Sbjct 886259 ACTTCCACAAGCTGGCCGCCGTGAC--CAAGGTGGTGGTCAGAAACCTGAACAAGATCAT 886202 Query 94746 CGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCAT 94805 ||||| |||| |||||| || || ||||| ||| ||| ||| | || |||||||| Sbjct 886201 CGACATCAACTACTACCCGGTGCCCGAGGCCGAGCGCTCCAACAGGCGCCACCGGCCCAT 886142 Query 94806 CGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCC-TACGACT 94864 ||| |||||||||||||| | |||||||| | | | ||||| || ||| | ||| Sbjct 886141 CGGGATCGGCGTCCAGGGGCTGGCGGACGCCTTCATCCTCATGCG-CTACCCGTTCGAGA 886083 Query 94865 CTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCAT-G 94923 ||| || | |||| | || ||||| | ||| || |||| |||| | | Sbjct 886082 GCCCCGAGGCTCAGCTGCTGAACACCCAGATCTTCGAGACCATCTACTACGCGGCCCTGG 886023 Query 94924 AAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCAC-ACGAATCGTTCCGCGGATC 94982 | | | | | ||| ||||| | || | ||||| | |||| | | || || Sbjct 886022 AGGCCAGCTG-CCAGCTGGCC---GCCGA-GCTGGGCCCCTACGAGAGCTACGAGGGCTC 885968 Query 94983 GCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTA 95042 ||| | ||||| | | |||| |||| | ||||| || |||| | | |||| Sbjct 885967 CCCCGTCAGCAAGGGCGTCCTCCAGTACGACATGTGGGGGAAGACGCCCACCGAGCTGTG 885908 Query 95043 CGACTGG--GAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTT 95100 |||||| | |||| | | | || | | ||||| |||| ||| ||||| Sbjct 885907 GGACTGGCAGCAGCTGAAGGAGAGGA--TCGCCCGGCACGGCGTGAGGAACAGCCTGCTC 885850 Query 95101 GTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAA 95160 |||||||||||||||| |||||||| || |||||||| |||||||||||||| |||| Sbjct 885849 CTGGCCCCCATGCCCACCGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAG 885790 Query 95161 CCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAAC 95220 ||| |||| |||| | |||| | ||||||| | ||||| |||| || ||||| Sbjct 885789 GCCTACACCAGCAACATCTACACGCGCAGGGTGCTGTCGGGGGAGTTCCAGATCGTCAAC 885730 Query 95221 AAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAA 95280 ||||| || |||||||||| ||| ||||| || | | |||||||| Sbjct 885729 CCCCACCTGCTCAAGGACCTGACGGAGAGGGGCCTGTGGAACGAGGACATGAAGAACCAG 885670 Query 95281 CTGCTACGCGC-CAACGGCTCCGTCCAG 95307 || | ||| | |||||||||||||||| Sbjct 885669 CT-CATCGCCCACAACGGCTCCGTCCAG 885643 >seq14703 Length=1421099 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 95072 TCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGC 95131 ||| ||| || || | ||| ||||| |||| ||||||||||| ||||||||||| | Sbjct 454235 TCAGACATGGCGTCAGGAACAGCCTGCTGCTGGCTCCCATGCCCACCGCCTCCACGGCCC 454294 Query 95132 AGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACA 95182 ||||||| || ||||||||||| ||||| ||| |||| |||| | |||| Sbjct 454295 AGATCCTGGGGAACAACGAGTCCTTCGAGGCCTACACCAGCAACATCTACA 454345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494563818737080