Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq14537 334 8e-87 seq14703 86.0 6e-12 seq14557 86.0 6e-12 seq7053 84.2 2e-11 seq3173 84.2 2e-11 seq18908 82.4 8e-11 >seq14537 Length=2063196 Score = 334 bits (370), Expect = 8e-87 Identities = 1007/1536 (66%), Gaps = 38/1536 (2%) Strand=Plus/Plus Query 153009 AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAA 153068 ||||| | || || || ||||||| | || ||||| |||| || ||| | | | Sbjct 885710 AGGTCCTTGAGCAGGTGGGGGTTGACGATCTGGAACTCCCCCGACAGCACCCTGCGCGTG 885769 Query 153069 TATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTT 153128 || | ||||| ||| | | || | ||| ||||| ||||| || || || || |||| Sbjct 885770 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 885829 Query 153129 GCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTC 153187 ||||| |||||| |||| | || |||| || ||||||| | ||| || || Sbjct 885830 GCGGTGGGCATGGGGGCCAGGAGCAGGCTGTTCCTCACGCCGTGCCGGGCGATCCTC-TC 885888 Query 153188 CTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAA 153247 ||||| | |||||| ||||||||| | | || ||| ||||||||||||||| | Sbjct 885889 CTTCAGCTGCTGCCAGTCCCACAGCTCGGTGGGCGTCTTCCCCCACATGTCGTACTGGAG 885948 Query 153248 CACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCA 153306 || || ||| |||| ||| | | | |||| ||| || | ||||| Sbjct 885949 GACGCCCTTGCTGACGGGGGAGCCCTCGTAGCTCTCGTAGGGGCCCA-GCTCGGCGGCCA 886007 Query 153307 GTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAA 153366 | | |||||| ||||| || || | ||||| ||||| ||| ||| || | || || | Sbjct 886008 GCTGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCA 886067 Query 153367 CGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCT 153426 || || ||||||| |||| ||||| || | |||||||| ||||| |||| Sbjct 886068 GCTGAGCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCT 886127 Query 153427 GGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT-ATGGGA 153485 ||| |||| |||||||| || || | |||| |||| ||| |||| | || Sbjct 886128 GGACGCCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGC-TCGGCCTCGGGCACCGGG 886186 Query 153486 TAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTA 153545 |||| ||| ||||| || ||||| ||||| | |||||||| || || | || Sbjct 886187 TAGTAGTTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCACGGCGGCC 886246 Query 153546 AGTTTCTCGAAATCATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGA 153604 || || | ||| || |||| ||| | | ||||| || || | || || || Sbjct 886247 AGCTTGTGGAAGTCGAAGGTGCACTCGGGGGTGACGTAC--ATG--TTGAGCGCGATGGA 886302 Query 153605 CGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAG 153664 ||||| || ||||||||| ||| ||| | | |||| | ||||||||| | ||| || Sbjct 886303 GGCCAGGTTGCAGACGGCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGTGCACAG 886362 Query 153665 GTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTT 153724 |||||||| ||| ||| ||||| || ||||| ||||| || | ||||| |||||||| Sbjct 886363 GTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTT 886422 Query 153725 GAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT--------AAACCTA 153776 | ||||||||||||| |||||| || || | |||| ||| | ||| Sbjct 886423 GTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACC-- 886480 Query 153777 TGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTAC 153836 ||| || ||| | | ||| |||| || ||||||||| ||||||| ||| Sbjct 886481 TGCTGGGCCTTCAC---CACGCGCT--TGA-CGCGGCCCTCCTTCTCGTAGGAGGTGTAG 886534 Query 153837 AGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATC 153896 || ||||||||| || || |||| ||| | |||||| || | | |||||||||| Sbjct 886535 AGCTTCTCAAACTCCTCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATC 886594 Query 153897 AGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCG 153956 || ||||| | || | | || | |||||||| || || | |||||||||| Sbjct 886595 AGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCG 886654 Query 153957 TACATGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCA 154014 || | ||||| | || | ||| |||||| ||| |||| ||||| | || | Sbjct 886655 TAGAACAGGTCCCTGGCTCTCTGC--TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGA 886712 Query 154015 CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---T 154071 | | ||| |||| ||||||||| || | ||| | ||| | ||| || ||| | Sbjct 886713 AGTCAAAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGT 886772 Query 154072 TTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGC 154131 | || ||||| || |||| ||| || | |||||| | || | || |||||| |||||| Sbjct 886773 TCCCTCCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGC 886832 Query 154132 CGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGC--AC 154189 || | | | ||||||||| ||| | || || ||| || | || || || Sbjct 886833 CGTTGGAGTGGCCGTTGGTGCCGGCGATGTAACTCCCCGTGGCTCGGA--TGCAGCTGAC 886890 Query 154190 GTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTA 154249 | ||||| ||||| ||| | |||| || ||| ||||| | ||||| ||| Sbjct 886891 GGCCACGCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTA 886950 Query 154250 GATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAAT 154309 ||||| |||||||| ||||| | | | |||| ||| || ||| ||||| Sbjct 886951 AATGCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCG 887010 Query 154310 GCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCAT 154369 | || || || ||||| ||||| ||||| || ||| || | || || Sbjct 887011 GTTGGTGCCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAG 887070 Query 154370 GCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCAT 154429 | ||| ||||||||||| | ||||| || | ||| ||||||| | ||| | ||| Sbjct 887071 GTTGTAGGTTTCGATGGCCGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCAT 887130 Query 154430 GAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTC 154489 |||||||||||||| || ||||| ||| | || ||||||| || || || Sbjct 887131 CAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTC 887190 Query 154490 GAGGGTTTTGTAACCGAAATACTTGTATTCAAAATC 154525 ||||| ||| | ||||| | ||||| |||||| Sbjct 887191 CAGGGTCTTGAAGCCGAAGAAGTTGTACGAAAAATC 887226 >seq14703 Length=1421099 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||| | |||||||| | ||| |||||||||||| | ||| ||||| || ||||| | Sbjct 453439 TGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGATGGTGCCCAGGTTCTGCTGGT 453380 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 |||| || | ||||| ||||| ||| ||||||||||||| Sbjct 453379 TGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGG 453340 >seq14557 Length=1650391 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||||| || | || | | | ||||| || || |||||||||||| Sbjct 91281 GCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 91340 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || || || || || || || | | |||| || | ||| || || || || Sbjct 91341 CAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 91400 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | ||||||| | | |||||| Sbjct 91401 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 91460 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 ||| | || | ||||| ||||| || || || ||||| |||||||||| Sbjct 91461 CTCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGG 91510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | ||| |||| || | || | | | |||||||| || |||||||||||| | Sbjct 90826 CCACCCCTCAATCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 90885 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || || || || | | |||| || | ||| || || || || Sbjct 90886 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 90945 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | || | ||||||| | | ||||||| Sbjct 90946 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 91005 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | ||||| ||||| || || || || || ||||||||| || Sbjct 91006 TCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCT 91056 >seq7053 Length=111041 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCC 52454 |||||| |||||||||| ||| || ||||| | || || || ||| |||||||||| Sbjct 46837 GAGCGCGTGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCC 46896 Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513 ||||| | | || | | |||| | |||||||||||||| ||| ||||||| |||| Sbjct 46897 ATCTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGAT 46955 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCC 52454 |||||| |||||||||| ||| || ||||| | || || || ||| |||||||||| Sbjct 51774 GAGCGCGTGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCC 51715 Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513 ||||| | | || | | |||| | |||||||||||||| ||| ||||||| |||| Sbjct 51714 ATCTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGAT 51656 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCC 52454 |||||| |||||||||| ||| || ||||| | || || || ||| |||||||||| Sbjct 60695 GAGCGCGTGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCC 60636 Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513 ||||| | | || | | |||| | |||||||||||||| ||| ||||||| |||| Sbjct 60635 ATCTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGAT 60577 >seq3173 Length=1876 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCC 52454 |||||| |||||||||| ||| || ||||| | || || || ||| |||||||||| Sbjct 480 GAGCGCGTGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCC 421 Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513 ||||| | | || | | |||| | |||||||||||||| ||| ||||||| |||| Sbjct 420 ATCTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTGAT 362 >seq18908 Length=594 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138422 ACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAAT 138481 |||| || || |||||||||||| || || || || || || || || || | | Sbjct 567 ACTCTTTCTGCATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAA 508 Query 138482 AGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATT 138541 |||| || | ||| || || || || || ||||| ||||| ||| || || | | Sbjct 507 AGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGT 448 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | ||||||| | | ||||||||| | || | ||||| ||||| || || || | Sbjct 447 TCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGA 388 Query 138602 CAAAAATCTGCATGG 138616 |||| |||||||||| Sbjct 387 CAAAGATCTGCATGG 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496102522864560