Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq14537 149 6e-31 seq14703 91.5 1e-13 >seq14537 Length=2063196 Score = 149 bits (164), Expect = 6e-31 Identities = 504/772 (65%), Gaps = 20/772 (3%) Strand=Plus/Plus Query 146044 AGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA 146103 ||| |||||| || | ||||||| | ||| ||||| || | || || | | | Sbjct 885710 AGGTCCTTGAGCAGGTGGGGGTTGACGATCTGGAACTCCCCCGACAGCACCCTGCGCGTG 885769 Query 146104 TACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTA 146163 || | |||||||||| | | ||||| ||||||||||| || || ||||| || || | Sbjct 885770 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 885829 Query 146164 GCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCC 146223 ||||| |||||| |||| |||| ||| ||||||||||| | ||| | ||| Sbjct 885830 GCGGTGGGCATGGGGGCCAGGAGCAGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCTCC 885889 Query 146224 CGTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGC 146283 || | ||| | ||||| | || ||||| | | ||||||| || Sbjct 885890 TTCAGCTGCTGCCAGTCCCACA---GCTCGGTGGGCGTCTTCCCCCACATGTCGTACTGG 885946 Query 146284 ATAGTGCC---GCGGAACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTT- 146339 | ||| || || ||| || |||||| || || || || | || Sbjct 885947 AGGACGCCCTTGCTGACGGGGGAGCC---CTCGTAGCTCTCGTAGGGGCCCA-GCTCGGC 886002 Query 146340 GGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTT 146399 |||||| | |||||| || ||||| |||| |||| |||||||| |||| | ||| Sbjct 886003 GGCCAGCTGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTT 886062 Query 146400 GACGCTCCTG-GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCG 146457 | || ||| ||||| ||| ||| | ||| || || | || | |||||||| || Sbjct 886063 CA-GCAGCTGAGCCTCGGGGCTCTCGAACGGG-TAGCGCATGAGGATGAAGGCGTCCGCC 886120 Query 146458 AGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCG-C 146516 || ||||| | |||| || | ||| ||||| | |||| | | | || | | | Sbjct 886121 AGCCCCTGGACGCCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTCGGGC 886180 Query 146517 AGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAA 146576 | ||| |||| |||| |||||||||||||||| || || | || || | || |||| Sbjct 886181 ACCGGG-TAGTAGTTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCAC 886239 Query 146577 ACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGC 146636 |||| | |||| || || | | ||||| || |||||| || Sbjct 886240 GGCGGCCAGCTTGTGGAAGTCGAAGGTGCAC---TCGGGGGTGACGTACATGTTGAGCGC 886296 Query 146637 GATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGC 146696 ||| ||||||| ||| || ||||| |||||| || | || | ||| ||||| | Sbjct 886297 GATGGAGGCCAGGTTGCAGACGGCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGT 886356 Query 146697 GCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGG 146756 ||| |||||||||| |||||| |||||| || | ||||| || | ||||||||| Sbjct 886357 GCACAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGC 886416 Query 146757 GTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATG 146808 ||| ||||||||||||||||| |||||||| | || ||||| |||| Sbjct 886417 GTCTTTGTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATG 886468 >seq14703 Length=1421099 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 146664 CTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCC 146723 |||||||||| | || | || ||||| | ||| ||||||||||| ||||| |||| Sbjct 453453 CTCGTCCTTGCTGGTGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGATGGTGCC 453394 Query 146724 CAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCC 146783 || || | ||||| || | ||||||||| ||||||||||||||||||||| || Sbjct 453393 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTGCC 453334 Query 146784 GGTTTCGACATTGGTCTCGACGATG 146808 ||||| | || ||||| |||| Sbjct 453333 TGTTTCCGTTTGGGACTCGATGATG 453309 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 146070 CACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAA 146129 |||||||||||| || | || || | | | || | |||||||||| | | |||||| Sbjct 454377 CACCTGAAACTCTCCTGAAAGGACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAA 454318 Query 146130 CGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAA 146189 ||||||||||| || || ||||| ||||| | ||||| |||||| |||| ||||| Sbjct 454317 GGACTCGTTGTTCCCCAGGATCTGGGCCGTGGAGGCGGTGGGCATGGGAGCCAGCAGCAG 454258 Query 146190 AGAGTTTCTCACGCCGTGTCT 146210 ||| || ||||| ||||| Sbjct 454257 GCTGTTCCTGACGCCATGTCT 454237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475347611473520