Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq14537 149 6e-31 seq14703 95.1 1e-14 >seq14537 Length=2063196 Score = 149 bits (164), Expect = 6e-31 Identities = 876/1397 (63%), Gaps = 30/1397 (2%) Strand=Plus/Minus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 || || ||||| || || || ||||| ||| | ||| | | ||| | ||| | | Sbjct 887160 AAAGTGGCCGAGCGGCCGCAGCACATGCTGATGAGGGTCTCCGTCGGCATCCACCAAAAC 887101 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 |||||||| || | |||||| ||| | || |||| | || | ||||| ||||| Sbjct 887100 GACATCGACGCGGCCATCGAAACCTACAACCTGCTGTCGGAGAAGTGGTTCACCCACGCC 887041 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 ||||| | ||| ||| ||||| || ||| ||| |||| || || |||| Sbjct 887040 TCGCCCACGCTCTTCAACGCAGGCACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTG 886981 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 || || || ||||||||| || || || || || | | |||||| | || Sbjct 886980 GCCATGAAGGACGACAGCATCGAGGGCATTTACGACACGCTCAAGCAGTGCGCGCTCATC 886921 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGC 123197 ||||| | | ||| ||||| |||||| ||| | | | ||| | || || | Sbjct 886920 TCCAAGTCGGCCGGGGGCATCGGCGTGGCCGTCAGCTGCATCCGAGCCACGGGGAGTTAC 886861 Query 123198 ATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAAC 123257 ||| ||||| |||| | || ||| || | |||||||| |||||||||| ||| Sbjct 886860 ATCGCCGGCACCAACGGCCACTCCAACGGCCTGGTGCCCATGCTGAGAGTTTACAACAAC 886801 Query 123258 GCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATCTA 123314 | | || |||| |||||||| || ||| || ||||| | || || || || Sbjct 886800 ACGGCACGCTACGTGGACCAGGGAGGGAACAAGCGGCCCGGCGCCTTCGCCATGTACCTG 886741 Query 123315 GAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAA 123374 || || |||||| | || || | || || | | | || |||| |||| ||| Sbjct 886740 GAGCCCTGGCACTTCGACGTCTTTGACTTCCTGGAGCTGAAGAAGAACACGGGGAAGGAG 886681 Query 123375 GAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGC 123434 || ||| |||| | || |||| ||||| | ||| | ||||| ||||| ||| | Sbjct 886680 GAGCAGAGAGCCAGGGACCTGTTCTACGCGCTCTGGATCCCCGACTTGTTCATGAAGAGG 886621 Query 123435 GTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGAC 123494 || | | || | ||||| || |||||||| || || |||||||||| ||| Sbjct 886620 GTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCGGACGAATGCCCCGGCTTGAACGAG 886561 Query 123495 GTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCA-----AAC 123549 | || | ||||||| || | ||| | |||||| || ||| || Sbjct 886560 TGCTGGGGGGAGGAGTTTGAGAAGCTCTACACCTCCTACGAGAAGGAGGGCCGCGTCAAG 886501 Query 123550 AGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAA 123609 | | || | | || ||| ||| | | || ||||| | || |||| Sbjct 886500 CGCGTGGTGAAGGCCCAGCAGGTG-----TGGCACGCCATCATCGAGTCCCAGACGGAAA 886446 Query 123610 CCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACT 123669 |||| || ||||||||||||||||||||||||||||||||||| | ||| ||| ||| Sbjct 886445 CCGGCACCCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAACC 886386 Query 123670 TGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATC 123729 |||| || || ||| | || || || ||| | || || | ||||||| | ||| Sbjct 886385 TGGGCACCATCAAAAGCAGCAACCTGTGCACGGAGATCGTGGAATACACCAGCAGCGACG 886326 Query 123730 AAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG-TGAATCGTTGCGTCGAAAACG---GC 123785 | |||||||| || || |||| || | | ||| | || | |||| || || Sbjct 886325 AGGTGGCCGTCTGCAACCTGGCCTCCA-TCGCGCTCAACATGTACGTCACCCCCGAGTGC 886267 Query 123786 GCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAACAAA 123845 | || | ||||| | ||| | | || || || || | || ||||||| Sbjct 886266 ACCTTCGACTTCCACAAGCTGGCCGCCGTGACCAAGGTGGTGGTCAGAAACCTGAACAAG 886207 Query 123846 ATTATCGATGTTAATTTTTATCCTTTG---GAGGAAGCGCGTTTGTCTAATTTGAAACAC 123902 || ||||| | || | || || || |||| | ||| || || | ||| Sbjct 886206 ATCATCGACATCAACTACTACCCGGTGCCCGAGGCCGAGCG---CTCCAACAGGCGCCAC 886150 Query 123903 AGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCG 123962 | || |||| | ||| | || ||| |||| ||||| || | | ||||| ||| Sbjct 886149 CGGCCCATCGGGATCGGCGTCCAGGGGCTGGCGGACGCCTTCATCCTCATGCGCTACCCG 886090 Query 123963 TACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGC 124022 | ||| ||| ||| || || |||| || || || || ||| || || || |||| Sbjct 886089 TTCGAGAGCCCCGAGGCTCAGCTGCTGAACACCCAGATCTTCGAGACCATCTACTACGCG 886030 Query 124023 GCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGC 124082 || ||||||| |||||| | || || | ||| | ||||| || |||| |||| Sbjct 886029 GCCCTGGAGGCCAGCTGCCAGCTGGCCGCCGAGCTGGGCCCCTACGAGAGCTACGAGGGC 885970 Query 124083 AGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTG 124142 ||| | ||| || | | ||||||||||||||| || || || | || Sbjct 885969 TCCCCCGTCAGCAAGGGCGTCCTCCAGTACGACATGTGGGGGAAGACGCCCACCGAGCTG 885910 Query 124143 TGGGACTGG-AGCGTTTTAAAACAACGCATATCGAC--GCACGGTTTGCGTAACTCGCTG 124199 ||||||||| ||| | || | | |||| | |||||| || | ||| ||| Sbjct 885909 TGGGACTGGCAGCAGCTGAAGGAGAGG---ATCGCCCGGCACGGCGTGAGGAACAGCCTG 885853 Query 124200 TTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTC 124259 | |||| |||||| || || |||| || || || | || |||||||| ||| || Sbjct 885852 CTCCTGGCCCCCATGCCCACCGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATC 885793 Query 124260 GAGCCGTTCACTAACAA 124276 ||| | | ||| | ||| Sbjct 885792 GAGGCCTACACCAGCAA 885776 >seq14703 Length=1421099 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 || ||||| | ||| ||||| || |||||||||||||||||||| |||||||||||| Sbjct 453310 ATCATCGAGTCCCAAACGGAAACAGGCACGCCGTACATGCTCTACAAGGACGCCTGCAAC 453369 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATT 123707 ||||| | ||| ||| ||| |||| || || | ||| || || || ||| | || || Sbjct 453370 AGGAAGAGCAACCAGCAGAACCTGGGCACCATCAGATGCAGCAACCTGTGCACGGAGATC 453429 Query 123708 ATCGAATACA 123717 | ||||||| Sbjct 453430 GTAGAATACA 453439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451857581519080