Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq15039 120 4e-22 seq14996 114 2e-20 seq13841 109 8e-19 >seq15039 Length=1367303 Score = 120 bits (132), Expect = 4e-22 Identities = 129/168 (77%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 9553 TCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGG 9612 || |||| ||| | |||||| |||| ||||| |||||||||| || || ||||||||| Sbjct 1316960 TCGGGCATCAGCGGGTGCCAGTGGTACAGGGTGTTGAACTCGGATGCGATGCGGTTCTGG 1317019 Query 9613 TACTGAAAGGCGGTACC-GAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCC 9671 ||||| || || | | |||||| | ||| |||||||| | |||| ||| ||||| || Sbjct 1317020 TACTGGAAA-CGCTCCTTGAACAGCAGCTCTGGGTCAAACTTGAGCTTGAAATGGTAGCC 1317078 Query 9672 GCTGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 ||| || ||||||||||| | | ||||| ||| || ||||| || || Sbjct 1317079 GCTCAGGTGCTGGACATAGTCTTCGATTACAATCTTGATGGTCTCTCC 1317126 >seq14996 Length=1273618 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 8963 TCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGC 9022 || || |||||||||||||||||||||||| |||||||||||||| |||| |||| || Sbjct 185176 TCTCCCCCGAAGGTGCTGGGTTTCCAGTACTCCGGGGAGCAGATGGCGTTTCCCATCAGG 185117 Query 9023 CCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073 ||||| | || ||||||||||||| || | |||||||| || |||||| Sbjct 185116 CCTTTGAGAGAGAACGGAGCCCCCATCTGAAACATGCTCTCTCCAAAGATG 185066 >seq13841 Length=41484 Score = 109 bits (120), Expect = 8e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 || |||| ||||| ||||| ||||| || | || || || ||||||||||||||||| Sbjct 1723 GTGGCGGAATTCACTATGTCAAAACCGACCTTGCCCCCAAATGTGCTGGGTTTCCAGTAT 1782 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 | || || || ||| || ||| ||| || || | ||| | || || |||| ||| Sbjct 1783 TCGGGAGAACATATGGGATTTCCCAAGAGTCCCTTGAGGGAGTAGGGGGCACCCATCTCC 1842 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAG 9112 | |||||||| || || ||||| || || | | ||| || | || || || | ||| Sbjct 1843 ACCATGCTCTCTCCAAATATGGCCCCCGGTCTTGTTTTCTCCAACATCAAACCGGGGTAA 1902 Query 9113 AGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCT 9167 ||| | ||| |||| ||||||||||| |||| | |||| ||||| |||| Sbjct 1903 TATTCCAGAGCGTCGATGTCGCCATAGAACTCTTCGAGCTCGCGGGCTATTTCCT 1957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723494841978200