Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq14537 206 4e-48 seq14703 91.5 2e-13 >seq14537 Length=2063196 Score = 206 bits (228), Expect = 4e-48 Identities = 584/881 (66%), Gaps = 16/881 (2%) Strand=Plus/Plus Query 204884 TCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGAC 204943 ||||||||||| ||||||| ||| | || || | |||| | ||||||||| | Sbjct 886343 TCCACGATCTCCGTGCACAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTC 886402 Query 204944 TTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TCG 205002 || | ||| |||| ||| ||||| | |||| |||| | ||| | ||| |||| || ||| Sbjct 886403 TTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCG 886462 Query 205003 CAGAATGTGGGTCCACAATTCGCGAGCCT---CCACTTGCTTCACGTACATCCCTTGAGA 205059 || | | | ||||| | | |||| |||| |||| ||| | |||| Sbjct 886463 ATGATGGCGTG-CCACACCTGCTGGGCCTTCACCACGCGCTTGACG--CGGCCCTCCTT- 886518 Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTA-CACGTCCATCAGCCCTGGAC 205118 |||||| ||||| ||| | |||| || || | ||| || ||| || || | Sbjct 886519 CTCGTAGGAGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCAC-TCGTTCAAGCCGGGGC 886577 Query 205119 ATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGT 205178 ||| | ||||||||||||||||| ||| | | | |||||||| ||| |||| || Sbjct 886578 ATTCGTCCGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAAGT 886637 Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238 || |||||| || |||| ||||| || | ||| || | || | || ||||| Sbjct 886638 CGGGGATCCAGAGCGCGTAGAACAGGTCCCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCT 886697 Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | |||| ||||| ||| | | | |||| |||||| ||||| | ||| ||| | Sbjct 886698 TCTTCAGCTCCAGG-AAGTCAAAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGCGAAG 886756 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357 ||||| |||| ||||||||| ||||||||||| ||| | | | |||| |||||| | Sbjct 886757 GCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAAACTCTC 886816 Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCC 205417 ||||| |||||||| ||||||| | ||||| |||| | |||| || || Sbjct 886817 AGCATGGGCACCAGGCCGTTGGAGTGGCCGTTGGTGCCGGCGATGTAACTCCCCGTGGCT 886876 Query 205418 CTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACT-C 205476 | | | | || |||| |||| || || || | |||||| ||| | ||||||| | Sbjct 886877 CGGATGCAGCTGACGGCCACGCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGCACTGC 886936 Query 205477 TTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGA 205536 ||| || ||| ||| ||||| ||||| |||||| || | || ||| |||| Sbjct 886937 TTG-AGCGTGTCGTAAATGCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGCAGCT 886995 Query 205537 AGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCG 205596 | ||||| | ||||||||| |||| |||||||||||| ||||||| |||| | Sbjct 886996 GGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTGAACCA 887055 Query 205597 CTTCTCGCTCAAACACCTGTAGGTCTCCA-GCACGCTCTCCAGATCGAAGCCGTGAATAC 205655 |||||| || ||||||| || | | ||| || | ||| ||| || | Sbjct 887056 CTTCTCCGACAGCAGGTTGTAGGTTTCGATGGCCGC-GTCGATGTCGTTTTGGTGGATGC 887114 Query 205656 CTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCTTGA 205715 | | || || |||||| | | ||| || || | ||| ||| | |||| | ||| | Sbjct 887115 CGACGGAGACCCTCATCAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCA 887174 Query 205716 GCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTG 205756 |||| |||| | ||| ||||| || | | || |||||| Sbjct 887175 GCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAGAAGTTG 887215 Score = 167 bits (184), Expect = 4e-36 Identities = 281/407 (69%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 204107 GAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATC 204166 |||||||||| ||| || || || || | ||||| ||||| |||| | || Sbjct 885650 GAGCCGTTGTGGGCGATGAGCTGGTTCTTCATGTCCTCGTTCCACAGGCCCCTCTCCGTC 885709 Query 204167 AGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTG 204226 || ||| | |||||||||||||| |||||| || || || |||||||||| || ||| Sbjct 885710 AGGTCCTTGAGCAGGTGGGGGTTGACGATCTGGAACTCCCCCGACAGCACCCTGCGCGTG 885769 Query 204227 AACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTG 204286 | | |||| ||||| | | |||| | |||||||||||| | ||||| |||||| | Sbjct 885770 TAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 885829 Query 204287 GCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGC 204346 || ||||||||||| |||||||||||| ||| | ||| |||| || ||| | Sbjct 885830 GCGGTGGGCATGGGGGCCAGGAGCAGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCTCC 885889 Query 204347 TTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAG 204406 ||||| |||||| || | | |||| || |||||||||||| |||| | | Sbjct 885890 TTCAGCTGCTGCCAGTCCCACAGCTCGGTGGGCGTCTTCCCCCACATGTCGTACTGGAGG 885949 Query 204407 ATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGC 204466 | ||| | ||||| ||| ||||| ||| || || || ||| | |||||| Sbjct 885950 ACGCCCTTGCTGACGGGGGAGCCCTCGTAGCTCTCGTAGGGGCCCAGCTCGGCGGCCAGC 886009 Query 204467 TTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 | ||| ||| ||| ||| ||||| |||||||| |||||||| Sbjct 886010 TGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTG 886056 Score = 136 bits (150), Expect = 6e-27 Identities = 126/157 (80%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | |||||||| |||||| || || |||| Sbjct 885367 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGT 885426 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||||| ||||||||| ||||||||| |||||||| || || || ||||| ||||| Sbjct 885427 GGATGTTCATAGACTGGCTCTGGTCGATG-AAGGCGCCGCGGTCGGCCGCCATCTTGATG 885485 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065 | |||||||| || |||||||||||||||||| ||| Sbjct 885486 ACCGTCTTCTGGGAGATCTCCCACACCGTCTTGTACA 885522 >seq14703 Length=1421099 Score = 91.5 bits (100), Expect = 2e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 |||||| ||||| || || |||| || ||| | | |||| ||||| | | ||||| | Sbjct 454374 CTGAAACTCTCCTGAAAGGACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAAGGA 454315 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||||| || | ||||| || ||| ||| ||||||||||||||||| |||||| Sbjct 454314 CTCGTTGTTCCCCAGGATCTGGGCCGTGGAGGCGGTGGGCATGGGAGCCAGCAGCAGG 454257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794899030812880