Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq14991 102 3e-16 >seq14991 Length=3132200 Score = 102 bits (112), Expect = 3e-16 Identities = 365/563 (65%), Gaps = 16/563 (3%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| |||||||| || ||||||| || || ||||| |||| ||| | || || || Sbjct 2149598 ATTGGCATTGATCTGGGCACCACCTACTCCTGCGTAGGGGTTTTCCAGCACGGTAAAGTG 2149539 Query 450977 GAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGTAAGTT----TTA 451031 || || || || |||||||| || | || || | ||||| || | || ||| | | Sbjct 2149538 GAGATCATCGCCAATGACCAGGGGAACAGGACC-ACTCC--CA--GCTATGTTGCCTTCA 2149484 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAA 451091 | || |||| || || | ||| | ||||| ||| ||| || ||| | Sbjct 2149483 CTGACACAGAGAGGCTGATTGGGGACGCTGCCAAAAACCAGGTTGCCATGAACCCCACCA 2149424 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTG-TACAA 451150 ||||| | | |||||| ||||| | ||||| || | || | || ||| | | || Sbjct 2149423 ACACAATCTTTGATGCCAAACGGCTCATTGGGCGGAAGTTTACAGACACTACAGGTCCAG 2149364 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAA 451210 || | ||||| | ||| | | || | || | || || | || | | || Sbjct 2149363 TCTGACATGAAATTATGGCCTTTTAAAGTGATCAACGATAACGGGAGACCAAAGGTGCAG 2149304 Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || | |||||||| || | ||| | || ||| || ||||| || || ||||| || Sbjct 2149303 GTGGAGTATAAAGGGGAGAACAAAGCCTTCTATCCAGAGGAAATCTCCTCCATGGTCCTG 2149244 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 |||||||| || | ||||||| || | ||| || | ||||||| ||| Sbjct 2149243 GTGAAAATGAAGGAGATAGCAGAAGCCTACCTGGGTCAGAGGGTGTCAAATGCAGTCATT 2149184 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 |||||||| ||||||||||| || | || |||| || || ||||| || || || Sbjct 2149183 ACTGTTCCGGCTTATTTCAACGACTCCCAGAGGCAGGCGACCAAAGACGCCGGTGTGATC 2149124 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 | || || || ||||| | || || ||||| || || ||||| || | || |||||| Sbjct 2149123 TCCGGATTGAACGTTCTGAGGATCATCAATGAGCCCACCGCAGCAGCCATCGCTTATGGA 2149064 Query 451451 CTAGGAAAATCAAAAGAAACAGA 451473 | ||| |||| |||| ||| Sbjct 2149063 -TTGGA----CAAAGGAAAAAGA 2149046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975065985061484