Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq14537 123 3e-23 seq15032 93.3 5e-14 seq14764 93.3 5e-14 seq14747 93.3 5e-14 seq14637 93.3 5e-14 seq14600 93.3 5e-14 seq14553 93.3 5e-14 seq10117 93.3 5e-14 seq3586 93.3 5e-14 seq14703 82.4 9e-11 >seq14537 Length=2063196 Score = 123 bits (136), Expect = 3e-23 Identities = 591/915 (65%), Gaps = 27/915 (3%) Strand=Plus/Plus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||||||||| | ||||||| |||| |||| |||||||| ||||| || || ||||| Sbjct 885769 GTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGA 885828 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTC 109871 || ||||||||||| |||| ||| || ||||| | | || | | | || ||| Sbjct 885829 GGCGGTGGGCATGGGGGCCAGGAGCAGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCTC 885888 Query 109872 ACGCAT-TGCGTCCCAATCATAACGACCACTAAATTTA-GTCTCACCATCCCACATATCT 109929 || ||| | ||| || | || || | |||| || |||||| || Sbjct 885889 CTTCAGCTGC-TGCCAGTC----CCACAGCTCGGTGGGCGTCTTCCC---CCACATGTCG 885940 Query 109930 GGTTGAAGTACACCCTCAGCAG-CAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAAC 109988 || || || |||| || | | || || |||| | | |||||||| | ||| | Sbjct 885941 TACTGGAGGACGCCCTT-GCTGACGGGGGAGCCCTCGTAGCTCTCGTAGGGGCCCAGCTC 885999 Query 109989 CTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGC 110048 |||||| || | | ||||| || ||||| | || || ||||| || || || | Sbjct 886000 GGCGGCCAGCTGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGT 886059 Query 110049 ATTCATGAGGCGAGACTCTTCACAGTCGAA-GGGAAGACCACAAAGAATAAACACATCCG 110107 |||| || ||| ||| | ||||| ||| || || | || | || | |||| Sbjct 886060 GTTCAGCAGCTGAGCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGA-TGAAGGCGTCCG 886118 Query 110108 CTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCG-TCGAGCAGTT 110166 | || ||||| || |||| || ||||| || || | |||| ||||| ||| | Sbjct 886119 CCAGCCCCTGGACGCCGATCCCGATGGGCCGGTGGCGCCTGTTGGAGCGCTCGGCCTCGG 886178 Query 110167 TCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTG 110226 | || ||||| ||||| |||||||| | || || || | ||| ||| || Sbjct 886179 GC-ACCGGGTAGTAGTTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTC 886237 Query 110227 ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGA 110286 | | || |||| | | ||||| || | || |||| || || ||| Sbjct 886238 ACGGCGGCCAGCTTGTGGAAGTCGAAGGTGCAC---TCGGGGGTGACGTACATGTTGAGC 886294 Query 110287 GCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCC 110346 || || || || || ||||| || | |||||| || ||||||||||| || ||| Sbjct 886295 GCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCC 886354 Query 110347 GTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCAT 110406 || |||| |||| || || ||| |||| ||||| ||| || || |||||| Sbjct 886355 GTGCACAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAG 886414 Query 110407 GCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTC 110466 || || || ||||||||||| ||||| || ||||||||||| |||| || ||||| | | Sbjct 886415 GCGTCTTTGTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGC 886474 Query 110467 CATACAT-CGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTA 110525 || || | | | | | || || || || | || |||| |||||| |||||| Sbjct 886475 CACACCTGCTGGGCCTTCACCACGCGC-TTGACGCGGCCCTCCTTCTCGTAGGAGGTGTA 886533 Query 110526 CAAGTCCTCAAATTCCTGTCCGTA-CACATCAGAAAGACCCTTCGCCTT-GTCGGGACAG 110583 | | |||||| |||| || | ||| || | | || || || ||| ||||| Sbjct 886534 GAGCTTCTCAAACTCCTCCCCCCAGCAC-TC-GTTCAAGCCGGGGCATTCGTCCGGACAC 886591 Query 110584 AAGAGGGACCAAT-TTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACAT 110642 | || ||||| | | || ||| |||||||||||||||| ||| || ||||| | Sbjct 886592 ATCAGAGACCAGTCCTGGTTGCT-CTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAG 886650 Query 110643 CGCCGAGAAAAGGTC 110657 ||| |||| ||||| Sbjct 886651 CGCGTAGAACAGGTC 886665 >seq15032 Length=853965 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 593145 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 593203 >seq14764 Length=2867368 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 2669917 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 2669975 >seq14747 Length=494992 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 285198 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 285140 >seq14637 Length=292691 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 83228 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 83286 >seq14600 Length=441212 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 204264 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 204322 >seq14553 Length=1206717 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 16320 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 16378 >seq10117 Length=178459 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 11351 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 11293 >seq3586 Length=1922 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 1599 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 1541 >seq14703 Length=1421099 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 110316 CTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACC 110375 |||||| ||| ||||||||| | || ||||| |||| |||| | | ||| || Sbjct 453453 CTCGTCCTTGCTGGTGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGATGGTGCC 453394 Query 110376 CAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACC 110435 || ||||| ||| || || |||||| || ||||| ||||||||||| || || || Sbjct 453393 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTGCC 453334 Query 110436 AGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 |||||||| || |||| || ||||| | ||| Sbjct 453333 TGTTTCCGTTTGGGACTCGATGATGGCGTACCA 453301 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||||||||| | ||||||| ||||| |||| ||||| || ||||| || || ||||| Sbjct 454344 GTAGATGTTGCTGGTGTAGGCCTCGAAGGACTCGTTGTTCCCCAGGATCTGGGCCGTGGA 454285 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844 || |||||||||||||||| || || ||||| Sbjct 454284 GGCGGTGGGCATGGGAGCCAGCAGCAGGCTGTT 454252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588786254019400