Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq14537 304 2e-77 seq14196 118 2e-21 seq7053 114 2e-20 seq3173 114 2e-20 seq14703 93.3 8e-14 >seq14537 Length=2063196 Score = 304 bits (336), Expect = 2e-77 Identities = 803/1216 (66%), Gaps = 30/1216 (2%) Strand=Plus/Plus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGA 221478 |||||| |||| |||||||||||| |||||| |||| || || |||||||| Sbjct 886024 CAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGAGCCTCGGGGCT 886083 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||| || |||| | ||| |||| ||||| ||||| || ||||| ||||| Sbjct 886084 CTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACGCCGATCCCGAT 886143 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGCCG-CTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 ||||| ||| | ||||||||| ||| || | || ||||| || || |||||| ||||| Sbjct 886144 GGGCCGGTGGCGCCTGTTGGA-GCGCTCGGCCTCGGGCACCGGGTAGTAGTTGATGTCGA 886202 Query 221598 TCAGATTGTTGAGGTT-CAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656 | | ||||| ||||| | || | || || ||| ||| |||||| ||| | | Sbjct 886203 TGATCTTGTTCAGGTTTCTGACC-ACCACCTTGGTCACGGCGGCCAGCTTGTGGAAGTCG 886261 Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716 || ||||| | | ||| ||| ||| || || | | |||| Sbjct 886262 AAGGTGCACTCGGGGGTGACGT-----------ACAT----GTTGAGCGCGATGGAGGCC 886306 Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTG 221776 ||||| || |||||||||||||| || |||| || | | |||||| || || |||||| Sbjct 886307 AGGTTGCAGACGGCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTG 886366 Query 221777 CTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAG 221836 |||| |||||||| ||||||| | || || ||| | ||| ||||| |||||| Sbjct 886367 CTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAG 886426 Query 221837 AGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG 221896 ||||| | || ||| || ||| ||| | | | | || || ||| | | | Sbjct 886427 AGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGG 886486 Query 221897 GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCA 221956 || ||||| | |||||| ||||| ||| || || ||| |||||| | ||| Sbjct 886487 GCCTTCACCACGCGCTTGACGCGGCCCTC---CTTCTCGTAGGAGGTGTAGAGCTTCTCA 886543 Query 221957 AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAG 222016 |||| || || | ||||| || ||| || || | | |||||||||||| |||| Sbjct 886544 AACTCCTCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGACCAG 886603 Query 222017 TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGA 222076 | || |||| | ||||||| |||||| | ||| |||||||| ||||| | || || Sbjct 886604 TCCTGGTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGG 886663 Query 222077 TCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATG 222136 || |||| | |||||||||| || |||| ||| |||| |||| || ||||| | | Sbjct 886664 TCCCTGGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACG 886723 Query 222137 TCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGA 222196 || |||||| |||||||| || | ||| | |||||||| |||||||| || ||||| Sbjct 886724 TCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGG 886783 Query 222197 TCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256 ||||| | || |||| | | | || | || ||||| |||||||| | Sbjct 886784 TCCACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGG 886843 Query 222257 CCGTTGGTGCCCTTAATGT-ACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGAT 222315 ||||||||||| |||| || | ||| ||| | | | ||| | | || |||||| Sbjct 886844 CCGTTGGTGCCGGCGATGTAACTCCCCG-TGGCTCGGATGCAGCTGACGGCCACGCCGAT 886902 Query 222316 ACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCAT 222375 || ||||| || ||||| | ||||| |||||| ||||| |||||||| || Sbjct 886903 GCCCCCGGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGAT 886962 Query 222376 AGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGC 222435 ||| ||||| | | |||||| || || |||| ||| | | ||| | || Sbjct 886963 GCTGTCGTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCTGC 887022 Query 222436 GTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTC 222495 ||| || |||||||| |||||| || || | | |||| ||| | ||| || || Sbjct 887023 GTTGAAGAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTTTC 887082 Query 222496 TACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTG 222555 | | | | |||||| || ||| || | || | ||||| ||||| ||| Sbjct 887083 GATGGCCGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTG 887142 Query 222556 GGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612 |||| || |||| || || || || |||||||| || ||||| ||||| Sbjct 887143 CGGCCGCTCGGCCACTTTGCCGTT-GATCT--TCAGCAGGTAGGAGCGCTCCAGGGTCTT 887199 Query 222613 GAACCCAAAGTAGTTG 222628 ||| || ||| ||||| Sbjct 887200 GAAGCCGAAGAAGTTG 887215 Score = 123 bits (136), Expect = 5e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 221030 TGTACAGAGCCCTTGTTGACCAAAAGCTCGGTACGCATCTCGTCCGTCCATAGACCCCTC 221089 || || ||||| |||| | | | |||| | | ||| || || |||| || |||||| Sbjct 885644 TGGACGGAGCCGTTGTGGGCGATGAGCTGGTTCTTCATGTCCTCGTTCCACAGGCCCCTC 885703 Query 221090 TCTTCCAGCACCTTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTC 221149 || ||| |||||| || ||| ||| || | ||||| || ||||| |||||||| Sbjct 885704 TCCGTCAGGTCCTTGAGCAGGTGGGGGTTGACGATCTGGAACTCCCCCGACAGCACCCTG 885763 Query 221150 CTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCC 221209 | | ||| | ||| ||| | | |||||| ||||||||||||||||||||| || Sbjct 885764 CGCGTGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCG 885823 Query 221210 GTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACTGTT 221247 ||| ||||||||||||||| |||| ||||| ||||| Sbjct 885824 GTGGAGGCGGTGGGCATGGGGGCCAGGAGCAGGCTGTT 885861 >seq14196 Length=26487 Score = 118 bits (130), Expect = 2e-21 Identities = 110/137 (80%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||||||||| || ||||| || |||||||||||||| ||| ||| || || || Sbjct 19398 GGGGAGCGGCTGGTGGCATTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCT 19457 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 |||||| |||||| ||| | ||| |||| |||||| || ||| | ||| |||||||| Sbjct 19458 TCCATCTACTGGCTGAAG-AAAAGAGGACTCATGCCAGGCCTGACGTATTCAAACGAGCT 19516 Query 25992 CATCAGCAGGGACGAGG 26008 |||||||||||||||| Sbjct 19517 GATCAGCAGGGACGAGG 19533 >seq7053 Length=111041 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| |||||||| || |||||||| ||||| ||| || || ||||| Sbjct 46834 GGAGAGCGCGTGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCC 46893 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 |||||||||||||| ||| || || |||||||| ||| ||| ||||||||||| Sbjct 46894 GCCATCTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTG 46953 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| ||||||| Sbjct 46954 ATCAGCAGAGACGAGG 46969 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| |||||||| || |||||||| ||||| ||| || || ||||| Sbjct 51777 GGAGAGCGCGTGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCC 51718 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 |||||||||||||| ||| || || |||||||| ||| ||| ||||||||||| Sbjct 51717 GCCATCTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTG 51658 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| ||||||| Sbjct 51657 ATCAGCAGAGACGAGG 51642 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| |||||||| || |||||||| ||||| ||| || || ||||| Sbjct 60698 GGAGAGCGCGTGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCC 60639 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 |||||||||||||| ||| || || |||||||| ||| ||| ||||||||||| Sbjct 60638 GCCATCTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTG 60579 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| ||||||| Sbjct 60578 ATCAGCAGAGACGAGG 60563 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||| |||||||| ||||| ||||| || |||| |||||||||||||||||||| ||| Sbjct 47587 AACCCTTTCGACTTCATGGAGAACATCTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAG 47646 Query 26305 AGGGTCGGCGACTATCA 26321 || || ||||| || || Sbjct 47647 AGAGTGGGCGAGTACCA 47663 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||| |||||||| ||||| ||||| || |||| |||||||||||||||||||| ||| Sbjct 51025 AACCCTTTCGACTTCATGGAGAACATCTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAG 50966 Query 26305 AGGGTCGGCGACTATCA 26321 || || ||||| || || Sbjct 50965 AGAGTGGGCGAGTACCA 50949 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||| |||||||| ||||| ||||| || |||| |||||||||||||||||||| ||| Sbjct 59948 AACCCTTTCGACTTCATGGAGAACATCTCTCTGGAGGGGAAGACCAACTTCTTTGAGAAG 59889 Query 26305 AGGGTCGGCGACTATCA 26321 || || ||||| || || Sbjct 59888 AGAGTGGGCGAGTACCA 59872 >seq3173 Length=1876 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||| |||||||| || |||||||| ||||| ||| || || ||||| Sbjct 483 GGAGAGCGCGTGGTGGCCTTTGCCGCCGTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCC 424 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 |||||||||||||| ||| || || |||||||| ||| ||| ||||||||||| Sbjct 423 GCCATCTTCTGGCTGAAGAAGCGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTG 364 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| ||||||| Sbjct 363 ATCAGCAGAGACGAGG 348 >seq14703 Length=1421099 Score = 93.3 bits (102), Expect = 8e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 221122 CACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGAT 221181 ||| || || ||||| || || ||||| | | ||| | ||| ||| | | |||| Sbjct 454377 CACCTGAAACTCTCCTGAAAGGACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAA 454318 Query 221182 GCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAG 221241 | ||||||||| ||||||||||| |||||| ||||||||||||||| |||| |||||| Sbjct 454317 GGACTCGTTGTTCCCCAGGATCTGGGCCGTGGAGGCGGTGGGCATGGGAGCCAGCAGCAG 454258 Query 221242 ACTGTT 221247 ||||| Sbjct 454257 GCTGTT 454252 Score = 91.5 bits (100), Expect = 3e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786 ||| ||||||||||||| |||| || | || |||||| || || ||||||||||| ||| Sbjct 453460 CGGTCACCTCGTCCTTGCTGGTGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGA 453401 Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCAT 221841 |||| ||||||| | || || ||| | ||| ||||||||||||||||| Sbjct 453400 TGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCAT 453346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928545561037120