Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq23023 897 0.0 seq23388 190 6e-44 >seq23023 Length=988 Score = 897 bits (994), Expect = 0.0 Identities = 790/986 (80%), Gaps = 0/986 (0%) Strand=Plus/Minus Query 3063 GAAGGTGTGGCCATGCACGCCTTTAACGGTGAACTGTTCGTTCAGGCCACCTGGGATACC 3122 ||||||||| |||||||||| || | ||||||| | | | ||||| |||||||| | | Sbjct 987 GAAGGTGTGCCCATGCACGCGTTAANCGGTGAATTATGCACGCAGGCGACCTGGGACAGC 928 Query 3123 AGTTCGTCGCGGCTTTTCCGGACACAGTTCCGGATGGTCAGCCCGAAGCGCATCAGCAAC 3182 ||| |||| |||||||| || |||||| |||||||| ||||||||| ||||||| Sbjct 927 GATTCAACGCGTCTTTTCCGTACTCAGTTCAANATGGTCAGTCCGAAGCGCGTCAGCAAT 868 Query 3183 CCGAACAATACCGGCGACAGCCGGAACTGCCGTGCCGGTGTGCAGATTAATGACAGCGGT 3242 ||||| |||| ||| || | ||||||||| || ||||||||| | || ||||| |||||| Sbjct 867 CCGAATAATATCGGTGATACCCGGAACTGTCGCGCCGGTGTGAAAATAAATGATAGCGGT 808 Query 3243 GCGGCGCTGGGATATTACGTCAGCGAGGACGGGTATCCTGGCTGGATGCCGCAGAAATGG 3302 || ||||||||||||||||||||||| || || ||||| ||||||||| ||||||| ||| Sbjct 807 GCTGCGCTGGGATATTACGTCAGCGACGATGGTTATCCCGGCTGGATGGCGCAGAACTGG 748 Query 3303 ACATGGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGTTTTTGAACCC 3362 || | || || || || |||||||||| || | || || || || || || ||||| Sbjct 747 ACCTACATTCCTCGCGAACTACCCGGCGGTCGACCTTCATTTATCCATGTATTCGAACCG 688 Query 3363 GTGGAGGACGGGCAGACTCGCGGTGCAAATGTGTTTTACAGCGTGATGGAGCAGATGAAG 3422 ||||||| || ||||| || || || |||| ||||||||||||||||||||||||||| Sbjct 687 ATGGAGGATGGACAGACCCGTGGGGCCAATGCGTTTTACAGCGTGATGGAGCAGATGAAA 628 Query 3423 ATGCTCGACACGCTGCAGAACACGCAGCTGCAGAGCGCCATTGTGAAGGCGATGTATGCC 3482 |||||||| || ||||| || || ||||| |||||||| || |||||||| ||||||||| Sbjct 627 ATGCTCGATACCCTGCAAAATACCCAGCTCCAGAGCGCGATAGTGAAGGCTATGTATGCC 568 Query 3483 GCCACCATTGAGAGTGAGCTGGATACGCAGTCAGCGATGGATTTTATTCTGGGCGCGAAC 3542 || ||||| |||||||| |||||||| || || |||||||| |||||||| |||||| | Sbjct 567 GCTACCATCGAGAGTGAACTGGATACCCAATCGGCGATGGACTTTATTCTCGGCGCGGAT 508 Query 3543 AGTCAGGAGCAGCGGGAAAGGCTGACCGGCTGGATTGGTGAAATTGCCGCGTATTACGCC 3602 | | | ||||||| | | || || |||||| | |||||||| || | |||||| | Sbjct 507 AATAAAGAGCAGCAGAGCAAACTTACGGGCTGGCTCGGTGAAATGGCGTCCTATTACTCA 448 Query 3603 GCAGCGCCGGTCCGGCTGGGAGGCGCAAAAGTACCGCACCTGATGCCGGGTGACTCACTG 3662 || ||||| || || ||||| || |||| || || |||||| |||||||||| || || Sbjct 447 GCTGCGCCTGTTCGCCTGGGTGGGGCAAGGGTTCCACACCTGTTGCCGGGTGATTCTCTC 388 Query 3663 AACCTGCAGACGGCTCAGGATACGGATAACGGCTACTCCGTGTTTGAGCAGTCACTGCTG 3722 ||||| ||| |||| |||||||| |||||||||||||| ||||| ||||| |||||| Sbjct 387 AACCTTCAGTCGGCGCAGGATACCGATAACGGCTACTCGACTTTTGAACAGTCCCTGCTG 328 Query 3723 CGGTATATCGCTGCCGGGCTGGGTGTCTCGTATGAGCAGCTTTCCCGGAATTACGCCCAG 3782 || ||||| || || ||||| ||||| ||||||||||||||||| || || || | ||| Sbjct 327 CGTTATATTGCCGCTGGGCTTGGTGTGTCGTATGAGCAGCTTTCGCGAAACTATTCGCAG 268 Query 3783 ATGAGCTACTCCACGGCACGGGCCAGTGCGAACGAGTCGTGGGCGTACTTTATGGGGCGG 3842 ||||||||||| || ||||| || ||||| |||||||| |||||||||||||||||||| Sbjct 267 ATGAGCTACTCGACCGCACGCGCAAGTGCTAACGAGTCCTGGGCGTACTTTATGGGGCGT 208 Query 3843 CGAAAATTCGTCGCATCCCGTCAGGCGAGCCAGATGTTTCTGTGCTGGCTGGAAGAGGCC 3902 || || || || |||||||| ||||| | ||||||||||| |||||||| |||||||| Sbjct 207 CGCAAGTTTGTGGCATCCCGACAGGCCTGTCAGATGTTTCTTTGCTGGCTTGAAGAGGCG 148 Query 3903 ATCGTTCGCCGCGTGGTGACGTTACCTTCAAAAGCGCGCTTCAGTTTTCAGGAAGCCCGC 3962 || || ||||||||||| ||| | ||||| ||||| || |||||||| ||||| || | Sbjct 147 ATTGTCCGCCGCGTGGTCACGCTTCCTTCGAAAGCCCGGTTCAGTTTCCAGGAGGCGAGA 88 Query 3963 AGTGCCTGGGGGAACTGCGACTGGATAGGCTCCGGTCGTATGGCCATCGATGGTCTGAAA 4022 | ||||||||||| | ||||||| ||||| ||||| ||||| || || || |||||| Sbjct 87 ACAGCCTGGGGGAATGCCAACTGGATTGGCTCTGGTCGAATGGCAATTGACGGGCTGAAA 28 Query 4023 GAAGTTCAGGAAGCGGTGATGCTGAT 4048 || || ||||| || || ||||| || Sbjct 27 GAGGTACAGGAGGCCGTCATGCTCAT 2 >seq23388 Length=2009 Score = 190 bits (210), Expect = 6e-44 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 47108 ACCTCGCGGGTTTTCGCTATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCGTTCTTCTT 47167 ||||| | |||||| |||||||||| || ||| || |||||||| ||| ||| || Sbjct 283 ACCTCTCAGGTTTTTTG-ATTTATGAAAGTTG-CCGTTTAAAGGCGTT-CCGGTCTGCTG 339 Query 47168 CGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAACGACAGGTGC 47227 |||||||||||||| ||||| ||| |||||||||||| | |||||||||||||||||||| Sbjct 340 CGTCATAACTTAATTTTTTTGTTTGAAATACCCTCTGGAGAGAAAGGAAACGACAGGTGC 399 Query 47228 TGAAAGCGAGCTTTTTGGCCTCTGTCGTTTCCTTTCTCTGTTTTTGTCCGTGGAATGAAC 47287 |||||||||| | |||||||||||||||| |||| ||||| |||||||| ||||||| || Sbjct 400 TGAAAGCGAGGTGTTTGGCCTCTGTCGTTGCCTTGCTCTGGTTTTGTCC-TGGAATGGAC 458 Query 47288 A 47288 | Sbjct 459 A 459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151153724578500