Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq23023 1424 0.0 >seq23023 Length=988 Score = 1424 bits (1578), Expect = 0.0 Identities = 907/986 (92%), Gaps = 0/986 (0%) Strand=Plus/Minus Query 3054 GAAGGTGTAGCAATGCATGCGTTTAACGGTGAATTATGCATGCAGGCGACATGGGACAGC 3113 |||||||| | ||||| ||||| | |||||||||||||| ||||||||| ||||||||| Sbjct 987 GAAGGTGTGCCCATGCACGCGTTAANCGGTGAATTATGCACGCAGGCGACCTGGGACAGC 928 Query 3114 GATTCAACGCGTCTTTTCCGTACTCAGTTCAAAATGGTTAGTCCGAAGCGCGTCAGTAAT 3173 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||| Sbjct 927 GATTCAACGCGTCTTTTCCGTACTCAGTTCAANATGGTCAGTCCGAAGCGCGTCAGCAAT 868 Query 3174 CCAAGCAACATCGGTGATACCCGGAACTGTCGCGCCGGGGTAAAAATCAATAATAGTGGT 3233 || | || ||||||||||||||||||||||||||||| || ||||| ||| |||| ||| Sbjct 867 CCGAATAATATCGGTGATACCCGGAACTGTCGCGCCGGTGTGAAAATAAATGATAGCGGT 808 Query 3234 GCTGCGCTGGGATATTACGTCAGCGATGACGGTTATCCTGGTTGGATGGCGCAGAACTGG 3293 |||||||||||||||||||||||||| || |||||||| || |||||||||||||||||| Sbjct 807 GCTGCGCTGGGATATTACGTCAGCGACGATGGTTATCCCGGCTGGATGGCGCAGAACTGG 748 Query 3294 ACCTACATACCTCGCGAGCTCCCCGGAGGGCGCCCCTCTTTTATCCATGTCTTCGAACCG 3353 |||||||| |||||||| || ||||| || || || || ||||||||||| ||||||||| Sbjct 747 ACCTACATTCCTCGCGAACTACCCGGCGGTCGACCTTCATTTATCCATGTATTCGAACCG 688 Query 3354 ATAGAGGACGGACAGACCCGTGGAGCCAATGCGTTTTACAGCGTTATGGAGCAGATGAAA 3413 || ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 687 ATGGAGGATGGACAGACCCGTGGGGCCAATGCGTTTTACAGCGTGATGGAGCAGATGAAA 628 Query 3414 ATGCTCGATACCCTGCAAAACACCCAGCTCCAGAGTGCGATAGTGAAGGCCATGTATGCT 3473 |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 627 ATGCTCGATACCCTGCAAAATACCCAGCTCCAGAGCGCGATAGTGAAGGCTATGTATGCC 568 Query 3474 GCCACCATCGAGAGTGAGCTGGATACGCAGACGGCGATGGATTTCATTCTCGGCGCGGAT 3533 || |||||||||||||| |||||||| || |||||||||| || ||||||||||||||| Sbjct 567 GCTACCATCGAGAGTGAACTGGATACCCAATCGGCGATGGACTTTATTCTCGGCGCGGAT 508 Query 3534 AATAAAGAGCAGCAGAGCAAACTGACGGGCTGGCTCGGTGAAATGGCGTCCTATTACTCA 3593 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 507 AATAAAGAGCAGCAGAGCAAACTTACGGGCTGGCTCGGTGAAATGGCGTCCTATTACTCA 448 Query 3594 GCTGCGCCGGTTCGCCTGGGTGGGGCAAGGGTTCCACACCTGTTGCCGGGTGATTCTCTC 3653 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447 GCTGCGCCTGTTCGCCTGGGTGGGGCAAGGGTTCCACACCTGTTGCCGGGTGATTCTCTC 388 Query 3654 AACCTTCAGTCGGCGCAGGATACCGATAACGGCTACTCGACTTTTGAACAGTCACTGCTG 3713 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 387 AACCTTCAGTCGGCGCAGGATACCGATAACGGCTACTCGACTTTTGAACAGTCCCTGCTG 328 Query 3714 CGCTATATTGCCGCTGGGCTGGGTGTATCGTATGAGCAGCTTTCGCGAAATTATTCTCAG 3773 || ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| Sbjct 327 CGTTATATTGCCGCTGGGCTTGGTGTGTCGTATGAGCAGCTTTCGCGAAACTATTCGCAG 268 Query 3774 ATGAGTTACTCGACTGCGCGCGCAAGCGCTAACGAGTCATGGGCGTACTTCATGGGCCGT 3833 ||||| |||||||| || |||||||| ||||||||||| ||||||||||| ||||| ||| Sbjct 267 ATGAGCTACTCGACCGCACGCGCAAGTGCTAACGAGTCCTGGGCGTACTTTATGGGGCGT 208 Query 3834 CGCAAGTTTGTGGCATCCCGACAGGCCTGTCAGATGTTTCTTTGCTGGCTGGAAGAGGCA 3893 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 207 CGCAAGTTTGTGGCATCCCGACAGGCCTGTCAGATGTTTCTTTGCTGGCTTGAAGAGGCG 148 Query 3894 ATTGTCCGCCGCGTGGTCACACTTCCTTCAAAAGCCAGATTCAGCTTTCAGGAAGCGAGA 3953 |||||||||||||||||||| |||||||| |||||| | ||||| || ||||| |||||| Sbjct 147 ATTGTCCGCCGCGTGGTCACGCTTCCTTCGAAAGCCCGGTTCAGTTTCCAGGAGGCGAGA 88 Query 3954 ACAGCCTGGGGAAATGCCAACTGGATCGGCTCAGGCCGCATGGCTATTGACGGGCTGAAA 4013 ||||||||||| |||||||||||||| ||||| || || ||||| ||||||||||||||| Sbjct 87 ACAGCCTGGGGGAATGCCAACTGGATTGGCTCTGGTCGAATGGCAATTGACGGGCTGAAA 28 Query 4014 GAGGTACAGGAAGCCGTCATGCTCAT 4039 ||||||||||| |||||||||||||| Sbjct 27 GAGGTACAGGAGGCCGTCATGCTCAT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145005206935328