Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq14991 114 8e-20 seq14557 87.8 1e-11 >seq14991 Length=3132200 Score = 114 bits (126), Expect = 8e-20 Identities = 349/536 (65%), Gaps = 5/536 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 ||||| |||||| | || || || ||| || |||| |||| || | |||||||| Sbjct 2149598 ATTGGCATTGATCTGGGCACCACCTACTCCTGCGTAGGGGTTTTCCAGCACGGTAAAGTG 2149539 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || ||||||||||| || || || || || || |||||| | || ||||| Sbjct 2149538 GAGATCATCGCCAATGACCAGGGGAACAGGACCACTCCCAGCTATGTTGCCTTCACTGAC 2149479 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || || ||||| || ||||| ||| | || | ||| || || || || Sbjct 2149478 ACAGAGAGGCTGATTGGGGACGCTGCCAAAAACCAGGTTGCCATGAACCCCACCAACACA 2149419 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCAC-TGTCCAATCTGA 474570 || |||||||| ||| | | ||||| || || ||| || || || ||||| ||||| Sbjct 2149418 ATCTTTGATGCCAAACGGCTCATTGGGCGGAAGTTTACAGACACTACAGGTCCAGTCTGA 2149359 Query 474571 TATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATA--TATAGAAGCA 474628 ||| ||||||||||| ||||| || | | || | |||| | | || | | Sbjct 2149358 CATGAAATTATGGCCTTTTAAAGTGATCAACGATAACGGGAGACCAAAGGTGCAGGTGGA 2149299 Query 474629 ATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCC 474688 || | ||| || | ||| || | || || |||| || || ||||| | | Sbjct 2149298 GTATA--AAGGGGAGAACAAAGCCTTCTATCCAGAGGAAATCTCCTCCATGGTCCTGGTG 2149241 Query 474689 AAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 |||||||| | | || | || || || || || | ||||||| |||||| Sbjct 2149240 AAAATGAAGGAGATAGCAGAAGCCTACCTGGGTCAGAGGGTGTCAAATGCAGTCATTACT 2149181 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||| || ||||| || || || || | || || || ||||| || || || | Sbjct 2149180 GTTCCGGCTTATTTCAACGACTCCCAGAGGCAGGCGACCAAAGACGCCGGTGTGATCTCC 2149121 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 || | || ||| | | || || ||||| || || ||||| || | |||||||| Sbjct 2149120 GGATTGAACGTTCTGAGGATCATCAATGAGCCCACCGCAGCAGCCATCGCTTATGG 2149065 >seq14557 Length=1650391 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || ||||| |||||||| || || | || |||||||| ||||| |||||||| Sbjct 90897 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 90956 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| || || ||||| || || || | |||||||| || Sbjct 90957 GTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGAT 91016 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || ||||| ||||| ||||| || || Sbjct 91017 GGTTTTGCCAGTGAGGGTCTTGACGAAGATCTG 91049 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||||||||| ||||| |||||||| || || | || |||||||| ||||| |||||||| Sbjct 91125 ATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTT 91184 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| || || ||||| | ||| || | || ||||| || Sbjct 91185 GTCCTGGATCTTGGCCTTCACGTTCTCAATGTTGTCACTGGGCTCCACCTCGAGGGTGAT 91244 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || ||||| ||||| ||||| || || Sbjct 91245 GGTTTTGCCAGTGAGGGTCTTGACGAAGATCTG 91277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267073670979404