Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq14555 246 3e-60 >seq14555 Length=2216418 Score = 246 bits (272), Expect = 3e-60 Identities = 631/941 (67%), Gaps = 40/941 (4%) Strand=Plus/Plus Query 160062 TCCAGACATTGGACGGCGAACACGTCAACG-TCTTCG--TCGAATTTATTTGCGAACAGA 160118 |||||||| || ||||| ||||| || ||| | ||||| || || || ||||| Sbjct 878438 TCCAGACACCTGATGGCGA---CGTCATCGATCTCAGGATCGAACTTGTTGGCCAACAGG 878494 Query 160119 TGGTGAGCGTTCTGT-AGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACG 160177 || | || || |||| ||| | ||||| || | ||| ||||||| ||||| | Sbjct 878495 TGT----CTTTGTGCGAGGAGCCACCGGACGTCCCCTGCTCCGTACACGCACACGGATCT 878550 Query 160178 TATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTA 160237 ||| | ||| |||| || ||||| | || || | | ||||||| || | |||| Sbjct 878551 CCTGTAGTCCCCGGTGCAGGGTCGGTACGGGGCCCCCTGCTCCACGTCCCCCGCTAAGTA 878610 Query 160238 CTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAG 160297 |||||| || | | || | ||| ||||||| || |||||||| |||| | | Sbjct 878611 GCCCCACTTGACCACGCGCGCCAGGGCCAGCATGTCCGACGTGTCGTACTTGTCGTTGGG 878670 Query 160298 GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGG 160357 ||| || | || || || | |||||| | ||| ||||||||||||||||| ||||| || Sbjct 878671 GGGCACCGACCCCGGGACCCGGGGCATCCTCTGCAGGGTGGCCCACAGGTGCTCGTCCGG 878730 Query 160358 GCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCT----GTCCCGCAGAA 160413 |||| | |||||||| ||| |||| || | | | |||| |||| || Sbjct 878731 GCTGAAGGTGTCCTTCTCCCACTCCAGGAGCGCC----TGCACCTCCGCGTCCGTCAACG 878786 Query 160414 CGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTATGG 160473 |||| || | | |||| ||| || ||||| ||| | |||||||| || || || Sbjct 878787 CGTGGTGCACAAACGCCCTGGACACCACGAAGTAGGCGTTCCCGGAGAACATGGGGGTGT 878846 Query 160474 GTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGAC-ACCACTCCTTTCACCAGCGCG 160532 ||| ||||| | | | ||| | |||| ||| ||| | | ||| | | Sbjct 878847 TTATGGGCGGGGGGCCCTTGGTCGCGTCGGTCCG-GACGACCTGATCCGTGACCCG---G 878902 Query 160533 TGTCGCTTCTTCCACCTGACCATCTTGTG--CGGTGGCATGCGTTCCGTCTCTAGACTGT 160590 || | | || ||| | | || |||||| || ||| || |||| ||| | |||| Sbjct 878903 TGGTGGTACTGCCAGCGGCCCTTCTTGTAGTCGTTGG--TGGTCTCCGACTCCATGCTGT 878960 Query 160591 TG--GCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAA 160648 || || || || || | | |||| || || ||||| |||| || |||| || || Sbjct 878961 TGCTGCCCC-TC-AGGGTCTGCAGCGTCTGCACCATCTCCCGGTTGGTTTTGATGGGGAA 879018 Query 160649 GTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAG-GTCGTGCAGGTCCC 160707 |||| | ||||| ||| | || ||||||||| | | || | ||| ||||||| | Sbjct 879019 GTCGCTCCCGCATGTGTTCAGCAGGTACTTCCACTGGAC-CTGGGAGTCCAGCAGGTCTC 879077 Query 160708 TCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTT 160767 ||||||| || | || ||||| |||||| ||| || ||||| || ||| |||| | | Sbjct 879078 TCATGCAGTTCAGGTCCGCCTGGACGCGGGACCACGACGCGTAGACCACGCTCTCCATCT 879137 Query 160768 TACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACA 160827 | |||||| || ||||| || || |||||||| || |||| ||| |||| Sbjct 879138 TGGTGGCCAGGAACACGTTGGGGAGGCAGGACACGATGGCCCCCACGGCCGCCTTGAAC- 879196 Query 160828 TCTTATCC--GCCTTTC-GGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGG 160884 | |||| | |||| |||| ||||| ||||| || | |||||| || | |||||||| Sbjct 879197 --TCATCCTGGGATTTCTGGTCGACGTGGACGCAGTAGATGTTCTGCGGGGTGTAGATGG 879254 Query 160885 CCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCG 160944 ||| || | || |||||||||||| ||||| | |||||||| || ||||| || || | Sbjct 879255 CCCGCAGGAGCCGCTCGAACATCTCGATCTTCTCGTGGATCACCATGGAGTACGCGATGG 879314 Query 160945 GAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTAC 160985 | || | ||||||| ||||||| | | || | |||| Sbjct 879315 GGAAGTTCCTCTCCTCCTCGCTCAGGGGCTCCGTGATGTAC 879355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577033241619480