Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq14537 141 1e-28 seq14196 84.2 3e-11 >seq14537 Length=2063196 Score = 141 bits (156), Expect = 1e-28 Identities = 946/1494 (63%), Gaps = 48/1494 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||| ||||| | ||||||||||| | ||||| || | | | Sbjct 887145 CCGCAGCACATGCTGATGAGGGTCTCCGTCGGCATCCACCAAAACGACATCGACGCGGCC 887086 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || ||| || | |||| | | || ||||| ||||| | || || ||||| Sbjct 887085 ATCGAAACCTACAACCTGCTGTCGGAGAAGTG-GTTCACCCACGCCTCGCCCACGCTCTT 887027 Query 75331 CAATGCTGGTACACCAA--GACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||| || || |||||| | |||||| ||||||| |||||||| | |||| ||||| Sbjct 887026 CAACGCAGG--CACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTGGCCATGAAGGAC 886969 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| ||| | || || || | || || | | |||| |||| ||||| |||| ||| Sbjct 886968 GACAGCATCGAGGGCATTTACGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGTCGGCC 886909 Query 75449 GGGGGTATTGGGATGCACATCCATGATG--TGAGAGCCAATAAATCTCGTATTCGGGGGA 75506 ||||| || || || | || | || | |||||| | || || | Sbjct 886908 GGGGGCATCGGCGTGGCCGTCA--GCTGCATCCGAGCCACGGGGAGTTACATCGCCGGCA 886851 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || || || || | || | | || ||||| | || | ||| ||| || |||| Sbjct 886850 CCAACGGCCACTCCAACGGCCTGGTGCCCATGCTGAGAGTTTACAACAACACGGCACGCT 886791 Query 75567 ATGTAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 | || | || | ||| | || || | || |||| | ||| |||| || ||| Sbjct 886790 ACGTGGACCAGGGAGGGAACAAGCGGCCCGGCG-CCTTCGCCATGTACCTGGAGCCCTGG 886732 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCA-ACCAAGGTGACGAAGAGGCTCG 75681 || ||| || | || ||||| ||| | || | | || || || | || || Sbjct 886731 CACTTCGACGTCTTTGACTTCCTGGAGCT--GAAGAAGAACACGGGGAAGGAGGAGCAGA 886674 Query 75682 GTGT-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 | | || || || || | | || ||||| || ||| | ||||||||| |||| ||| Sbjct 886673 GAGCCAGGGACCTGTTCTACGCGCTCTGGATCCCCGACTTGTTCATGAAGAGGGTGGAGA 886614 Query 75741 --AGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGAC-GCG 75796 | || | |||||||| | ||||| ||| || || || | | | ||| || Sbjct 886613 GCAACCAGGAC--TGGTCTCTGATGTGTCCGGACGAATGCCCCGGCT-TGAACGAGTGCT 886557 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCG 75856 | ||| ||||||||||| |||||||| || || ||||||| | | ||| ||| Sbjct 886556 GGGGG-GAGGAGTTTGAGAAGCTCTACACCTCCTACGAGAAGGAGGGCCGCGTCAA-GCG 886499 Query 75857 ACTGTACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 || || | | | | || ||| | || || || | || |||||||| || || || Sbjct 886498 CGTGGTGAAGGCCCAGCAGGTGTGGCACGCCATCATCGAGTCCCAGACGGAAACCGGCAC 886439 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || || ||||| ||||| || || || |||| |||||| ||||| |||| |||| || Sbjct 886438 CCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCAC 886379 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||| ||| || || |||||||| || | || ||||| | || ||| ||| Sbjct 886378 CATCAAAAGCAGCAACCTGTGCACGGAGATCGTGGAATACACCAGCAGCGACGAGGTGGC 886319 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTT 76095 || ||||| |||| || ||||| || | ||| |||| ||| |||| || Sbjct 886318 CGTCTGCAACCTGGCCTCCATCGCGCTCAACATGTACGTCACCCCCGAG---TGCACCTT 886262 Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155 || | | || || | | || ||| | || || ||| || ||| |||| Sbjct 886261 CGACTTCCACAAGCTGGCCGCCGTGACCAAGGTGGTGGTCAGAAACCTGAACAAGATCAT 886202 Query 76156 TGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACC 76212 |||| || | || || || ||| | | ||| || || | ||| ||| | || Sbjct 886201 CGACATCAACTACTACCCGGTGCCCGAGGCCGAGCG---CTCCAACAGGCGCCACCGGCC 886145 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGA 76272 || || | || || || || || ||||| | || || | |||||| | || || Sbjct 886144 CATCGGGATCGGCGTCCAGGGGCTGGCGGACGCCTTCATCCTCATGCGCTACCCGTTCGA 886085 Query 76273 TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCT 76332 || || || | |||| | | ||||| || ||||| || |||| |||| Sbjct 886084 GAGCCCCGAGGCTCAGCTGCTGAACACCCAGATCTTCGAGACCATCTACTACGCGGCCCT 886025 Query 76333 GGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCC 76392 |||||| || || | |||| | | | || |||| |||| | ||||| |||| Sbjct 886024 GGAGGCCAGCTGCCAGCTGGCCGCCGAGCTGGGCCCCTACGAGAGCTACGAGGG--CTCC 885967 Query 76393 CGCGTC-CCAAGGG-GTGCTTCAGTTTGATATGT--GGGAAGGTG-AAACCAAGCTCAAC 76447 | |||| |||||| || || |||| || |||| |||||| | ||| |||| Sbjct 885966 CCCGTCAGCAAGGGCGTCCTCCAGTACGACATGTGGGGGAAGACGCCCACCGAGCT---G 885910 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507 | |||||| | || ||||| | ||| | | || | | ||||| || | Sbjct 885909 TGGGACTGGCAGCAGCTGAAGGAGAGGATCGCCCGGCACGGCGTGAGGAACAGCCTGCTC 885850 Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567 |||| || ||||| || ||||||||||| || ||| |||| || || || | | | || Sbjct 885849 CTGGCCCCCATGCCCACCGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAG 885790 Query 76568 CCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627 | ||||| | ||||||||| | | || || | || ||||| || |||||| Sbjct 885789 GCCTACACCAGCAACATCTACACGCGCAGGGTGCTGTCGGGGGAGTTCCAGATCGTCAAC 885730 Query 76628 AAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681 ||||| |||| ||||| | | ||| || || ||| | |||| |||||| Sbjct 885729 CCCCACCTGCTCAAGGACCTGACGGAGAGGGGCCTGTGGAACGAGGACATGAAG 885676 >seq14196 Length=26487 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493 || ||| |||||||||||||||| ||||| |||| ||| || ||||| ||||||||| Sbjct 20054 AATGCGGAGAATCCATTTGACTTCATGGAGGCCATTTCCCTGGAGGGGAAAACCAACTTC 20113 Query 65494 TTTGAGAAGCGAGTTGGGGACTAT 65517 |||||||| ||||||| || ||| Sbjct 20114 TTTGAGAAACGAGTTGCAGAATAT 20137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596377407646240