Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq14537 242 3e-59 seq14557 113 4e-20 seq18908 93.3 4e-14 >seq14537 Length=2063196 Score = 242 bits (268), Expect = 3e-59 Identities = 1003/1563 (64%), Gaps = 53/1563 (3%) Strand=Plus/Plus Query 138449 TCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGA 138508 ||||||| ||||| |||| | || ||| ||| || | ||| | ||| | || Sbjct 885678 TCATGTCCTCGTTCCACAGGCCCCTCTCCGTCAGGTCCTTGAGCAGGTGGGGGTTGACGA 885737 Query 138509 CCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACG 138568 ||| || || || | || || | || ||| |||||| ||||| | | ||| | | Sbjct 885738 TCTGGAACTCCCCCGACAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGATGG 885797 Query 138569 ATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAG 138628 | |||||||| ||||| ||||| || |||| ||||| |||||| |||| | || Sbjct 885798 ACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATGGGGGCCAGGAGCAGGC 885857 Query 138629 AATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC 138688 |||| | ||||| | ||| | ||||| ||| | ||||||||||| ||| Sbjct 885858 TGTTCCTCACGCCGTGCCGGGCGATCCTCTCCTTCAGCTGCTGCCAGTCCCACAGCTCGG 885917 Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGT 138748 | || | || |||||| |||||||| | | ||| || |||| ||| |||| Sbjct 885918 TGGGCGTCTTCCCCCACATGTCGTACTGGAGGACGCCCTTGCTGACGGGGGAGCCCTCGT 885977 Query 138749 ACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGT 138808 | ||||| || | ||| |||| || | ||| ||||| || || | |||| Sbjct 885978 AGCTCTCGTAGGGGCCCAGCTCGGCGGCCAGCTGGCAGCTGGCCTCCAGGGCCGCGTAGT 886037 Query 138809 AAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGC 138868 | || || ||| ||||| || |||| | ||||||| ||||||| |||| || Sbjct 886038 AGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGAGCCTCGGGGCTCTCGAACGGGTAGC 886097 Query 138869 GGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCA 138928 | | | |||| ||||| |||||||| || ||||| | |||| || || |||||| Sbjct 886098 GCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACGCCGATCCCGATGGGCCGGTGGCGCC 886157 Query 138929 GATTTGA-CGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATTTTGTTT 138984 || || |||| |||| ||| | || || ||||| | |||||||| ||||| Sbjct 886158 TGTTGGAGCGCT----CGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATGATCTTGTTC 886213 Query 138985 AAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCC 139043 | |||| || |||||||| ||| || | | | | || ||| | |||| | Sbjct 886214 AGGTTTCTGACCACCACCTTGGTC-ACGGCGGCCAGCTTGTGGAAGTCGAAGGTGCAC-- 886270 Query 139044 GTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGC 139103 ||| | ||||| ||| |||||| || ||||| | |||||| || || Sbjct 886271 ----TCGGGGGTGACGT--ACA----TGTTGAGCGCGATGGAGGCCAGGTTGCAGACGGC 886320 Query 139104 CACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGT 139163 ||| |||||| | | ||||||| || || || | |||| || || | ||||| || Sbjct 886321 CACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCTTTTGATGGT 886380 Query 139164 ACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGT 139223 || | || || || ||||| || | ||| || || |||||||| ||||| ||||| || Sbjct 886381 GCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGGGT 886440 Query 139224 GCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACG 139283 ||| |||||| || | ||| || ||| | ||| ||| ||| | || || Sbjct 886441 GCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACA----CCT-GCTGGGCCTTCAC- 886494 Query 139284 CACGTAAAGTTCGTCGCGCTCGTACTTTTC---------GTAGAGTTCGTCGAA-TCGTT 139333 |||| | | | |||| | | ||| || |||||| | || || || | Sbjct 886495 CACG---CGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTCTCAAACTCCTC 886551 Query 139334 CACC--GTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCC 139391 | || | | ||| ||| || | || | ||| |||||||| || ||||| | Sbjct 886552 CCCCCAGCACTCGT--TCAAG-CCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTG 886608 Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451 ||| || || | | ||||||||| || || ||||| | ||| | | || || | Sbjct 886609 GTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCT 886668 Query 139452 CGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGC 139511 || ||| || ||| ||| |||| |||| | ||||| ||||| ||||| Sbjct 886669 GGCTCTCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAA 886728 Query 139512 GTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGAC 139568 |||||| || ||||| || ||||| | ||||| ||| ||| || || || || || Sbjct 886729 GTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCAC 886788 Query 139569 GTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTT 139628 || ||| | | || ||| | || | || ||| ||| |||| ||| | | ||||| Sbjct 886789 GTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTT 886848 Query 139629 GGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGT-ACATTGATGCCGATTCCGC 139687 ||||| |||| ||| ||||||| | || | || | |||||| || | Sbjct 886849 GGTGCCGGCGATGTAACTCCCCGTGGCTCGGATG-CAGCTGACGGCCACGCCGATGCCCC 886907 Query 139688 CGCCAAATTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTG 139746 || | | ||||| || | |||| | || | | || ||||| || || |||||| Sbjct 886908 CGGCCGACTTGGAGATGAGCGCGCACT-GCTTGAGCGTGTCGTAAATGCCCTCGATGCTG 886966 Query 139747 TCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCA 139806 ||||||| ||| | | ||| ||||| || || ||||| | || ||||| || Sbjct 886967 TCGTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTG 887026 Query 139807 AACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATG 139866 || || || || ||||| |||||| | | ||||| || | ||| ||||||||| Sbjct 887027 AAGAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTAGGTTTCGATG 887086 Query 139867 GCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATC 139926 || | || || || |||||| ||||| ||||| | ||||||||| || || | Sbjct 887087 GCCGCGTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGC 887146 Query 139927 CGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTAGCCA 139986 || |||||||| ||| | ||| || ||| || | ||| ||||||||| |||| Sbjct 887147 CGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCG 887206 Query 139987 AAG 139989 ||| Sbjct 887207 AAG 887209 >seq14557 Length=1650391 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| || || || || || || ||| | Sbjct 91052 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTGGAGCCCAGC 90993 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 90992 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 90933 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | |||| || || ||| Sbjct 90932 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 90873 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| | || |||||||| | || || Sbjct 90872 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGATTGAGGGGTGG 90826 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | || || || || || ||||| || || || || || || || Sbjct 91511 ACCATGCAGATCTTTGTCAAGACCCTCACTGGCAAAACCATCACTCTTGAGGTGGAGCCC 91452 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || |||||||| ||||| ||||| || || || ||| Sbjct 91451 AGCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAT 91392 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||| || || ||||| || ||| | | | |||| || || Sbjct 91391 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTAC 91332 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || || || || || || ||| | || |||| || | |||||| Sbjct 91331 AACATCCAGAAAGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGGC 91281 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| || || ||||| || || ||| Sbjct 91280 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAAACCATCACCCTCGAGGTGGAGCCCAGT 91221 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || | || || |||||||| ||||| ||||| || || || ||||| Sbjct 91220 GACAACATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 91161 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || ||||| || ||| | | | |||| || || ||| Sbjct 91160 CAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAAC 91101 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || || || || || ||| | || |||| || | |||||| Sbjct 91100 ATCCAGAAAGAGTCCACCCTCCACCTTGTCCTGCGTCTGAGGGGAGGC 91053 >seq18908 Length=594 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||||||| | || || || || || ||||| || || || || || || || Sbjct 372 ACCATGCAGATCTTTGTCAAGACCCTCACTGGCAAAACCATCACTCTTGAGGTGGAGCCC 431 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || |||||||| ||||| ||||| || || || ||| Sbjct 432 AGCGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAT 491 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||| || || ||||| || ||| | | | |||| || || Sbjct 492 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTAC 551 Query 24881 AACATTCAAAAGGA 24894 ||||| || || || Sbjct 552 AACATGCAGAAAGA 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449752659864440