Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq14557 141 6e-29 seq18908 111 1e-19 >seq14557 Length=1650391 Score = 141 bits (156), Expect = 6e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||||||| | |||||| ||||| | |||| ||||||||| ||||| ||||| || Sbjct 90826 CCACCCCTCAATCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 90885 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| || || |||||||| | ||||| || | || Sbjct 90886 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 90945 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | || ||| ||| || Sbjct 90946 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 91005 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| ||| ||||| || || ||||||||||| || |||||||||||| Sbjct 91006 TCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 91053 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | |||||| ||||| | |||| ||| ||||| ||||| ||||| || Sbjct 91282 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 91341 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| || || |||||||| | ||||| || | || Sbjct 91342 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 91401 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || | || ||| ||| || Sbjct 91402 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 91461 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||| || ||||| || || ||||||||||| ||||||||||||||| Sbjct 91462 TCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 91509 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 |||||||||| | |||||| ||||| | |||| ||| ||||| ||||| ||||| || Sbjct 91054 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 91113 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| || || |||||||| | ||||| || | || Sbjct 91114 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 91173 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | || |||||||| | || || || ||| | || ||| ||| ||| || Sbjct 91174 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGTTGTCACTGGGCTCCACC 91233 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||| ||||| || || ||||||||||| || |||||||||||| Sbjct 91234 TCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 91281 >seq18908 Length=594 Score = 111 bits (122), Expect = 1e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTG-CTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAG 34830 ||||| | |||| | ||| ||||| ||||| ||||| || ||| |||| |||| || || Sbjct 581 AGGTGCAGGGTGGCACTCTTTCTGCATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAG 522 Query 34831 TTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTAT 34890 ||||| || || |||||||| | ||||| || | || | || |||||||| | || Sbjct 521 CTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGAT 462 Query 34891 TTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCC 34950 || || ||| | || | || ||| ||| || |||| || ||||| || || Sbjct 461 CTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTTTTGCC 402 Query 34951 CGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||||||| ||||||||||||||| Sbjct 401 AGTGAGGGTCTTGACAAAGATCTGCATG 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325590497143487