Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq14557 89.7 4e-13 >seq14557 Length=1650391 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/243 (68%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | || ||||||||||| ||| | || |||| | || Sbjct 91052 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTGGAGCCCAGC 90993 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || |||||| | ||| |||||| Sbjct 90992 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 90933 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || |||||||| || | | || || | ||||||||| Sbjct 90932 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 90873 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795 || || |||||||| || | ||| | || || |||| |||||| ||||||| | Sbjct 90872 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGATT--GAGGGGTGGTCAATAAAATT 90815 Query 107796 ATT 107798 ||| Sbjct 90814 ATT 90812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398751509431597