Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq14536 109 7e-19 seq14756 104 3e-17 seq13760 104 3e-17 seq14723 95.1 2e-14 seq15120 91.5 2e-13 seq14744 91.5 2e-13 seq8320 89.7 7e-13 seq7849 89.7 7e-13 seq25685 86.0 8e-12 seq5841 82.4 1e-10 >seq14536 Length=1273479 Score = 109 bits (120), Expect = 7e-19 Identities = 71/77 (92%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11725 CCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTC 11783 |||||||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| Sbjct 25949 CCCAGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 26008 Query 11784 GATTCCCCGACGAGGAG 11800 |||||||||||| |||| Sbjct 26009 GATTCCCCGACGGGGAG 26025 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 1015341 TTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 1015400 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 1015401 CCCCGACGGGGAG 1015413 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 25954 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 26013 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 26014 CCCGACGGGGAG 26025 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 1015342 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1015401 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 1015402 CCCGACGGGGAGG 1015414 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 26026 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 25967 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 25966 ATACTAACGAGGA 25954 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1015413 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1015354 Query 139413 TACTAACGAGGATTTTGGTA 139432 |||||||||||| ||||| Sbjct 1015353 TACTAACGAGGAAGGTGGTA 1015334 >seq14756 Length=772520 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 555620 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 555561 Query 8718 CCCGACGAGGAGCAG 8732 ||||||| |||| || Sbjct 555560 CCCGACGGGGAGTAG 555546 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 555620 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 555561 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 555560 CCCGACGGGGAG 555549 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 555548 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 555607 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 555608 ATACTAACGAGGA 555620 >seq13760 Length=57368 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 18916 TAGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 18975 Query 8715 TTCCCCGACGAGGAG 8729 |||||||||| |||| Sbjct 18976 TTCCCCGACGGGGAG 18990 Score = 104 bits (114), Expect = 3e-17 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||| Sbjct 18917 AGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 18976 Query 11787 TCCCCGACGAGGAG 11800 ||||||||| |||| Sbjct 18977 TCCCCGACGGGGAG 18990 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 18991 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 18932 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 18931 ATACTAACGAGGA 18919 >seq14723 Length=2014711 Score = 95.1 bits (104), Expect = 2e-14 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 |||||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||| Sbjct 244295 CCAGTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCG 244236 Query 11785 ATTCCCCGACGAGGAGG 11801 ||||||||||| ||||| Sbjct 244235 ATTCCCCGACGGGGAGG 244219 Score = 89.7 bits (98), Expect = 7e-13 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 8644 TGCCGATGCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGA 8703 |||||||| | | |||||||||||||||||| ||||| ||| ||||| | ||| ||| Sbjct 26538 TGCCGATGACC-AGTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGA 26480 Query 8704 CCGGGGTTCGATTCCCCGACGAGG 8727 ||||||||||||||||||||| || Sbjct 26479 CCGGGGTTCGATTCCCCGACGGGG 26456 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11726 CCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784 |||||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||| Sbjct 26529 CCAGTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCG 26470 Query 11785 ATTCCCCGACGAGG 11798 ||||||||||| || Sbjct 26469 ATTCCCCGACGGGG 26456 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 244291 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 244232 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 244231 CCCGACGGGGAG 244220 >seq15120 Length=1401173 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||| Sbjct 1243457 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 1243516 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 1243517 CCCCGACGGGGAG 1243529 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1243458 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1243517 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 1243518 CCCGACGGGGAG 1243529 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 1243531 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 1243472 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 1243471 TATACTAACGAGGA 1243458 >seq14744 Length=2579032 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11725 CCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTC 11783 ||| ||||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||| Sbjct 2432528 CCCGGTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTC 2432587 Query 11784 GATTCCCCGACGAGGAG 11800 |||||||||||| |||| Sbjct 2432588 GATTCCCCGACGGGGAG 2432604 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 2432533 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 2432592 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 2432593 CCCGACGGGGAG 2432604 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 2432606 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 2432547 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 2432546 TATACTAACGAGGA 2432533 >seq8320 Length=1774 Score = 89.7 bits (98), Expect = 7e-13 Identities = 68/78 (87%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 11725 CCCA-GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782 |||| ||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||| Sbjct 1314 CCCACGTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTT 1373 Query 11783 CGATTCCCCGACGAGGAG 11800 ||||||||||||| |||| Sbjct 1374 CGATTCCCCGACGGGGAG 1391 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 1320 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1379 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1380 CCCGACGGGGAG 1391 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | ||||| Sbjct 1392 ACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACT 1333 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 1332 ATACTAACGAGGA 1320 >seq7849 Length=33749 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 13729 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 13788 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 13789 CCCGACGGGGAG 13800 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||| Sbjct 13729 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 13788 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 13789 CCCGACGGGGAG 13800 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||| ||| | |||| ||| |||| | |||| Sbjct 13802 AACTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCAC 13743 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 13742 TATACTAACGAGGA 13729 >seq25685 Length=981 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| ||| ||||| ||| ||||||||||||||||| Sbjct 107 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCATGCGGAAGACCGGGGTTCGATTC 166 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 167 CCCGACGGGGAG 178 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||||||||||||||||| ||||| ||| ||||| ||| |||||||||||||||| Sbjct 106 GTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCATGCGGAAGACCGGGGTTCGATT 165 Query 11788 CCCCGACGAGGAG 11800 |||||||| |||| Sbjct 166 CCCCGACGGGGAG 178 >seq5841 Length=1778 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||||||||||||||| ||||| | | ||||| | ||| ||||||||||||||||| Sbjct 1370 TCCTCGTTAGTATAGTGGACAGTATCTCTGCCTGTCACGCGGAAGACCGGGGTTCGATTC 1311 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1310 CCCGACG-GGAG 1300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652634477887120