Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq14537 423 2e-113 seq14557 143 3e-29 seq18908 132 5e-26 seq14703 118 1e-21 seq7053 107 2e-18 seq3173 107 2e-18 >seq14537 Length=2063196 Score = 423 bits (468), Expect = 2e-113 Identities = 1027/1539 (67%), Gaps = 30/1539 (2%) Strand=Plus/Plus Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296 ||||||| | || ||| | | || || | ||| ||||| || | ||||| | ||| Sbjct 885708 TCAGGTCCTTGAGCAGGTGGGGGTTGACGATCTGGAACTCCCCCGACAGCACCCTGCGCG 885767 Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 || | |||||| || | | || | |||||||||||||||| ||||| ||||| | Sbjct 885768 TGTAGATGTTGCTGGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGG 885827 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416 || ||||||||| || | ||||| ||| | || ||| | || | Sbjct 885828 AGGCGGTGGGCATGGGGGCCAGGAGCAGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCT 885887 Query 148417 GCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCA 148476 |||||| | ||||||||| ||| | || ||| ||||||||||||||| | Sbjct 885888 CCTTCAGCTGCTGCCAGTCCCACAGCTCGGTGGGCGTCTTCCCCCACATGTCGTACTGGA 885947 Query 148477 GAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCT-GTACGGTCCGTGCGCCGCCGCC 148535 | | ||| ||| ||||| ||||||||| | || ||| || || || | || ||| Sbjct 885948 GGACGCCCTTGCTGACGGGGGAGCCCTCGTA-GCTCTCGTAGGGGCCCAGCTCGGCGGCC 886006 Query 148536 AGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC 148595 || | |||||| ||||| || || ||||||| || |||||| || || |||| ||| Sbjct 886007 AGCTGGCAGCTGGCCTCCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGC 886066 Query 148596 AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCC 148655 ||| ||| ||| ||| |||| |||| | | || ||||| || || ||| Sbjct 886067 AGCTGAGCCTCGGGGCTCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCC 886126 Query 148656 TGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC--- 148712 || ||||| | || ||||||||||| |||||||| ||| || |||| || Sbjct 886127 TGGACGCCGATCCCGATGGGCCGGTGGCGCCTGTTGGAG---CGCTCGGCCTCGGGCACC 886183 Query 148713 GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTG 148772 || |||| |||| |||||||||||||| || || | ||||||||||| || | | | Sbjct 886184 GGGTAGTAGTTGATGTCGATGATCTTGTTCAGGTTTCTGACCACCACCTTGGTCA--CGG 886241 Query 148773 CG--CAGCAATTCAAAATCGTACTTGTCATCTACGATG-----CATCGGTTCACGGCGAT 148825 || |||| | || ||| | || || | || ||| ||| | ||||| Sbjct 886242 CGGCCAGCTTGTGGAAGTCGAAGGTGCACTCGGGGGTGACGTACAT--GTTGAGCGCGAT 886299 Query 148826 AGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCA 148885 ||||| || ||||| |||||| ||| || | | |||| || |||||||| | ||| Sbjct 886300 GGAGGCCAGGTTGCAGACGGCCACCTCGTCGCTGCTGGTGTATTCCACGATCTCCGTGCA 886359 Query 148886 CAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTC 148945 ||| ||||||| |||||| ||||| ||||| || |||||||| |||||||| ||||| Sbjct 886360 CAGGTTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTC 886419 Query 148946 CTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCAG 149005 ||||| ||||||||||| ||| |||||| ||| | || | ||| | || Sbjct 886420 TTTGTAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACAC 886479 Query 149006 GTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCG 149065 | ||| || ||| ||| | ||| ||||||| |||||| | || || ||| Sbjct 886480 CTGCTGGGCCTTCACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTT 886539 Query 149066 CTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGA 149125 ||| ||| |||| || |||| |||| | |||||||| | || ||| ||||| || || Sbjct 886540 CTCAAACTCCTCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGA 886599 Query 149126 CCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACAT 149185 ||| | || | ||| | |||||| |||| ||||| | |||||||||||| | Sbjct 886600 CCAGTCCTGGTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAA 886659 Query 149186 GAGGTCGCGCGC-CT-TGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTG 149243 ||||| | || || ||| || || ||| |||| ||| | || | | Sbjct 886660 CAGGTCCCTGGCTCTCTGC--TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAAGTCA 886717 Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCG 149300 || | ||| |||||| ||||| | ||||| |||| ||||| |||||| || Sbjct 886718 AAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCT 886777 Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360 |||||||| |||| ||| || ||||||| | |||| | ||| || | | ||| || Sbjct 886778 CCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTG 886837 Query 149361 GCAGTG-CCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGAC 149419 | |||| ||||| || | ||| ||| || ||||| | | ||| || Sbjct 886838 G-AGTGGCCGTTGGTGCCGGCGATGTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCAC 886896 Query 149420 GCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCC 149479 ||||||||| ||| | |||| |||||| |||||| | |||||| ||| ||||| Sbjct 886897 GCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCC 886956 Query 149480 CTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGT 149539 ||||||||||||| |||||||| |||||| ||||| | ||| ||||| || Sbjct 886957 CTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGT 887016 Query 149540 GCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTA 149599 ||| || ||| | ||||| |||||| || || | |||| || || | ||| Sbjct 887017 GCCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTTGTA 887076 Query 149600 CGACTCGA-GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCA 149658 | |||| | ||| ||| ||||| | |||||||| | || ||| | |||||||| Sbjct 887077 GGTTTCGATGGCCGC-GTCGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCA 887135 Query 149659 TATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTG 149718 | |||||||| ||||| ||||||||| || || |||| |||| | || || | Sbjct 887136 TGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAGGG 887195 Query 149719 TCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757 ||||| |||| ||| | ||||| ||| |||||| ||| Sbjct 887196 TCTTGAAGCCGAAGAAGTTGTACGAAAAATCGCGGTCGT 887234 >seq14557 Length=1650391 Score = 143 bits (158), Expect = 3e-29 Identities = 155/203 (76%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || ||| | | | || || |||||||||| Sbjct 90855 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 90913 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| || || || |||||||||||||| |||||| || Sbjct 90914 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 90973 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| |||||| |||||||||| || | ||||| ||||||||| || || | Sbjct 90974 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGGGTGATGGTTTTGCCAGTGAGGG 91033 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || ||||| ||||||||| || Sbjct 91034 TCTTGACGAAGATCTGCATGCCT 91056 Score = 143 bits (158), Expect = 3e-29 Identities = 155/203 (76%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| ||| || ||| | | | || || |||||||||| Sbjct 91083 GGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCAAGCTGCTTGC 91141 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| || || || |||||||||||||| |||||| || Sbjct 91142 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 91201 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| |||| |||||||||| |||| ||||| ||||||||| || || | Sbjct 91202 TCACGTTCTCAATGTTGTCACTGGGCTCCACCTCGAGGGTGATGGTTTTGCCAGTGAGGG 91261 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || ||||| ||||||||| || Sbjct 91262 TCTTGACGAAGATCTGCATGCCT 91284 Score = 140 bits (154), Expect = 3e-28 Identities = 153/201 (76%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| ||| || ||| | | | || || |||||||||| Sbjct 91311 GGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCAAGCTGCTTGC 91369 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||| || || || |||||||||||||| |||||| || Sbjct 91370 CAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 91429 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| |||||| |||||||||| || | |||| ||||||||| || || | Sbjct 91430 TCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTGAGGG 91489 Query 133642 TTTTTACGAAAATCTGCATGG 133662 | || || || |||||||||| Sbjct 91490 TCTTGACAAAGATCTGCATGG 91510 >seq18908 Length=594 Score = 132 bits (146), Expect = 5e-26 Identities = 153/202 (76%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 133463 GGTGG-ACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTG 133520 ||||| |||||||||| || ||||| ||| || ||| | | | || || ||||||||| Sbjct 573 GGTGGCACTCTTTCTGCATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCAAGCTGCTTG 515 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || |||| |||||| || || || |||||||||||||| |||||| | Sbjct 514 CCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCC 455 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | ||||| |||||| |||||||||| || | |||| ||||||||| || || Sbjct 454 TTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTGAGG 395 Query 133641 GTTTTTACGAAAATCTGCATGG 133662 || || || || |||||||||| Sbjct 394 GTCTTGACAAAGATCTGCATGG 373 >seq14703 Length=1421099 Score = 118 bits (130), Expect = 1e-21 Identities = 94/113 (83%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 |||| ||||||||||| | |||||| ||||||||| |||| ||||| ||||| || | Sbjct 453439 TGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGATGGTGCCCAGGTTCTGCTGGT 453380 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCC 148976 ||||||| |||||||| ||||||||||| ||||||||||| ||| |||||| Sbjct 453379 TGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTGCCTGTTTCC 453327 >seq7053 Length=111041 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 120679 ATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATG 120738 |||||||||||| || |||||||||||||| | |||| | |||| | |||| ||| Sbjct 46955 ATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCTTCAGCCAGAAGATG 46896 Query 120739 GCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTC 120797 ||||||||| |||||| ||||| | ||||||||| ||||||||| |||| |||||| Sbjct 46895 GCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGGCCACCACGCGCTC 46837 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 120679 ATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATG 120738 |||||||||||| || |||||||||||||| | |||| | |||| | |||| ||| Sbjct 51656 ATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCTTCAGCCAGAAGATG 51715 Query 120739 GCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTC 120797 ||||||||| |||||| ||||| | ||||||||| ||||||||| |||| |||||| Sbjct 51716 GCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGGCCACCACGCGCTC 51774 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 120679 ATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATG 120738 |||||||||||| || |||||||||||||| | |||| | |||| | |||| ||| Sbjct 60577 ATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCTTCAGCCAGAAGATG 60636 Query 120739 GCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTC 120797 ||||||||| |||||| ||||| | ||||||||| ||||||||| |||| |||||| Sbjct 60637 GCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGGCCACCACGCGCTC 60695 >seq3173 Length=1876 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 120679 ATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATG 120738 |||||||||||| || |||||||||||||| | |||| | |||| | |||| ||| Sbjct 362 ATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCGCTTCTTCAGCCAGAAGATG 421 Query 120739 GCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTC 120797 ||||||||| |||||| ||||| | ||||||||| ||||||||| |||| |||||| Sbjct 422 GCGGCAAAGGAGCCCGAGAAGAAGATTCCCTCCACGGCGGCAAAGGCCACCACGCGCTC 480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483265059946520