Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq14557 102 5e-17 seq18908 98.7 7e-16 >seq14557 Length=1650391 Score = 102 bits (112), Expect = 5e-17 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | || | || || ||| |||||| || |||||||| ||||| Sbjct 91282 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 91341 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | || || || ||||| |||| | ||||||||| | || Sbjct 91342 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 91401 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || |||| | | ||| ||||||||| | ||||| Sbjct 91402 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCAATGGTGTCGCTGGGCTCCAC 91460 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 |||| ||||| ||||| || || | || || |||||||||||||| |||| Sbjct 91461 CTCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGGTTG 91513 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| ||||| || | || | || || ||| ||| || || |||||||| ||||| Sbjct 90825 ACCACCCCTCAATCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 90884 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||| || || || ||||| |||| | ||||||||| | || Sbjct 90885 CAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 90944 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || |||| | | ||| ||||||||| | |||| Sbjct 90945 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCAATGGTGTCGCTGGGCTCCA 91003 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| ||||| || || | || || || ||||||||||| Sbjct 91004 CCTCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 91052 >seq18908 Length=594 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 33555 GCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGC 33614 || |||||| || |||||||| ||||| || ||||| | || || | || || || || Sbjct 569 GCACTCTTTCTGCATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGC 510 Query 33615 AAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAA 33674 ||| |||| | ||||||||| | || | ||||| ||||| || || |||| Sbjct 509 AAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCA- 451 Query 33675 CATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTT 33733 | | ||| ||||||||| | ||||| |||| ||||| ||||| || || | || | Sbjct 450 CGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTGAGGGTCT 391 Query 33734 TTACAAAGATCTGCATAGTTG 33754 | |||||||||||||| |||| Sbjct 390 TGACAAAGATCTGCATGGTTG 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328600751300160