Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq8323 109 2e-20 seq1045 104 7e-19 seq14979 102 3e-18 seq15008 100 9e-18 seq14577 100 9e-18 seq14097 100 9e-18 seq14073 100 9e-18 seq8510 100 9e-18 seq15019 98.7 3e-17 seq14991 98.7 3e-17 seq14934 98.7 3e-17 seq14674 98.7 3e-17 seq10505 96.9 1e-16 seq1557 95.1 4e-16 seq2522 91.5 5e-15 seq8864 87.8 6e-14 seq606 87.8 6e-14 seq951 84.2 7e-13 >seq8323 Length=1351 Score = 109 bits (120), Expect = 2e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 945 ATAGCTGAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCA 886 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| |||||| Sbjct 885 ATCCCGGGTTTCAGC 871 >seq1045 Length=1048 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||| | Sbjct 325 GCTGAAATAGCTCAGTTGGGATAGCGTCAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 384 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 385 CCGGGTTTCAGC 396 >seq14979 Length=3670432 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 633368 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 633309 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 633308 TCCCGGGTTTCGGC 633295 >seq15008 Length=2108279 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 979504 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 979445 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 979444 CCCGGGTTTCGGC 979432 >seq14577 Length=3412681 Score = 100 bits (110), Expect = 9e-18 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 2760 GTGTTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCC 2818 ||| | ||| || ||| |||||||||||||||||| ||||||||||||||| |||||||| Sbjct 555176 GTGGTCATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCCC 555117 Query 2819 TGGTTCAACCCCGGGCTTCAGC 2840 |||||||| |||||| ||| || Sbjct 555116 TGGTTCAATCCCGGGTTTCGGC 555095 Score = 100 bits (110), Expect = 9e-18 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 2760 GTGTTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCC 2818 ||| | ||| || ||| |||||||||||||||||| ||||||||||||||| |||||||| Sbjct 555833 GTGGTCATGTGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCCC 555774 Query 2819 TGGTTCAACCCCGGGCTTCAGC 2840 |||||||| |||||| ||| || Sbjct 555773 TGGTTCAATCCCGGGTTTCGGC 555752 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 28192 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 28251 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 28252 CCGGGTTTCGGC 28263 >seq14097 Length=6016 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 4908 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 4967 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 4968 CCCGGGTTTCGGC 4980 >seq14073 Length=3609 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1067 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 1126 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 1127 CCCGGGTTTCGGC 1139 >seq8510 Length=1381 Score = 100 bits (110), Expect = 9e-18 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1010 GCTGAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1069 Query 2829 CCGGGCTTCA 2838 || || |||| Sbjct 1070 CCAGGTTTCA 1079 >seq15019 Length=5380426 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 5308973 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5309032 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5309033 CCGGGTTTCGGC 5309044 >seq14991 Length=3132200 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 603082 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 603141 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 603142 CCGGGTTTCGGC 603153 >seq14934 Length=82348 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||| | Sbjct 36650 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 36591 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 36590 CCGGGTTTCGGC 36579 >seq14674 Length=840909 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 127986 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 127927 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 127926 CCGGGTTTCGGC 127915 >seq10505 Length=10035 Score = 96.9 bits (106), Expect = 1e-16 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 2758 CTGTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCC 2817 |||| || || |||||| || ||||| ||||||| ||||||||||||||||||||||| Sbjct 9345 CTGTTTTCATAGCTGAAATATCTCAGCTGGGAGAATGTTAGACTGAAGATCTAAAGGTCC 9286 Query 2818 CTGGTTCAACCCCGGGCTTCAGC 2840 ||||||||| || ||| |||||| Sbjct 9285 CTGGTTCAAACCAGGGTTTCAGC 9263 >seq1557 Length=1103 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||| |||||||||||||| |||||||||||||||||| ||||||||||||| | Sbjct 340 GCTGAAATAGGTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCTGGTTCAAAC 281 Query 2829 CCGGGCTTCAGC 2840 | ||| ||| || Sbjct 280 CTGGGTTTCCGC 269 >seq2522 Length=1792 Score = 91.5 bits (100), Expect = 5e-15 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 2778 GCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTTC 2837 || ||||||||||||| |||||||||| ||||||||||||||||||||| |||||| ||| Sbjct 664 GCGCAGTTGGGAGAGCGTTAGACTGAACATCTAAAGGTCCCTGGTTCAAACCCGGGTTTC 605 Query 2838 AGC 2840 ||| Sbjct 604 AGC 602 >seq8864 Length=27891 Score = 87.8 bits (96), Expect = 6e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 ||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 22427 GCTAAAACAGCTCAGTTGGAAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 22368 Query 2829 C 2829 | Sbjct 22367 C 22367 >seq606 Length=2286 Score = 87.8 bits (96), Expect = 6e-14 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 2760 GTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCT 2819 ||| || | |||||| |||||||| ||||||||| |||||||||| |||||||||||| Sbjct 1852 GTGCTTGTAGCTGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAATCTCTAAAGGTCCCA 1911 Query 2820 GGTTCAACCCCGGGCTTCAGC 2840 | ||||| || ||| |||||| Sbjct 1912 GATTCAAACCAGGGTTTCAGC 1932 >seq951 Length=1065 Score = 84.2 bits (92), Expect = 7e-13 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 2760 GTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCT 2819 ||| || | |||||| |||||||| |||||||| |||||||||| |||||||||||| Sbjct 160 GTGCTTGTAGCTGAAATAGCTCAGCTGGGAGAGTGTTAGACTGAATCTCTAAAGGTCCCA 219 Query 2820 GGTTCAACCCCGGGCTTCAGC 2840 | ||||| || ||| |||||| Sbjct 220 GATTCAAACCAGGGTTTCAGC 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15845132121585