Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq14537 187 3e-42 seq14557 107 2e-18 seq14703 98.7 1e-15 seq18908 91.5 1e-13 >seq14537 Length=2063196 Score = 187 bits (206), Expect = 3e-42 Identities = 908/1426 (64%), Gaps = 24/1426 (2%) Strand=Plus/Minus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 |||| || |||| ||||||||| || || || || || ||||||||| || | || Sbjct 887182 CTACCTGCTGAAGATCAACGGCAAAGTGGCCGAGCGGCCGCAGCACATGCTGATGAGGGT 887123 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 | || ||||| ||| | ||||| ||||| ||| | ||||| ||| | || |||| Sbjct 887122 CTCCGTCGGCATCCACCAAAACGACATCGACGCGGCCATCGAAACCTACAACCTGCTGTC 887063 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703 ||| ||| || ||||| |||||||| | || ||| ||||| ||| ||| || Sbjct 887062 GGAGAAGTGGTTCACCCACGCCTCGCCCACGCTCTTCAACGCAGGCACCAACCGGCCGCA 887003 Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763 ||||| || || |||| ||||| || ||||||||||| ||||||||| |||| Sbjct 887002 GCTGTCCAGCTGCTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATTTACGACAC 886943 Query 7764 GCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGA 7823 ||| | ||||| || ||||| | | ||| || || || || ||| | | Sbjct 886942 GCTCAAGCAGTGCGCGCTCATCTCCAAGTCGGCCGGGGGCATCGGCGTGGCCGTCAGCTG 886883 Query 7824 CGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCC 7883 | | || |||| || || ||||| ||||||||| | ||| ||| | | ||| Sbjct 886882 CATCCGAGCCACGGGGAGTTACATCGCCGGCACCAACGGCCACTCCAACGGCCTGGTGCC 886823 Query 7884 CATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGG-GGGA--AAGCGCAA 7940 |||| || | || | ||| ||| ||| || | || |||||||| |||| ||||| Sbjct 886822 CATGCTGAGAGTTTACAACAACACGGCACGCTACGTGGACCAGGGAGGGAACAAGCGGCC 886763 Query 7941 AGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCT 8000 |||||| ||||| || ||||||| |||||| ||| | | | | || | || Sbjct 886762 CGGCGCCTTCGCCATGTACCTGGAGCCCTGGCACTTCGACGTCTTTGACTTCCTGGAGCT 886703 Query 8001 GCGTCGCAACATGGGTTGCGAAGA-CAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGG 8059 | |||| ||| || || ||| | ||| | || || |||| || | ||| Sbjct 886702 GAAGAAGAACACGGGGAAGGAGGAGCAG-AGAGCCAGGGACCTGTTCTACGCGCTCTGGA 886644 Query 8060 TGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCG 8119 | ||||| |||| |||| | | || | | || | ||||| || ||||| || | Sbjct 886643 TCCCCGACTTGTTCATGAAGAGGGTGGAGAGCAACCAGGACTGGTCTCTGATGTGTCCGG 886584 Query 8120 ATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAAT 8179 | ||||| || || | | || | ||||| | | |||| | Sbjct 886583 ACGAATGCCCCGGCTTGAACGAGTGCTGGGGGGAGGAGTTTGAGAAGCTCTACACCTCCT 886524 Query 8180 ACGAACACGACGG-CGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATT 8238 |||| | || || ||||| | ||| ||||| || | | || | |||||| Sbjct 886523 ACGAGAAGGAGGGCCGCGT-CAAGCGCGTGGTGAAGGCCCAGCAGGTGTGGCACGCCATC 886465 Query 8239 ATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCC 8298 ||||| | || | |||||||| | ||||||||||| ||||||||||| |||||| Sbjct 886464 ATCGAGTCCCAGACGGAAACCGGCACCCCGTACATGCTCTACAAAGACGCCTGCAACAGG 886405 Query 8299 AAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTA 8358 || ||||| || ||| |||||||||| ||||||| |||||| | || || || Sbjct 886404 AAGAGCAACCAGCAGAACCTGGGCACCATCAAAAGCAGCAACCTGTGCACGGAGATCGTG 886345 Query 8359 CAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCG 8418 | |||| | |||||| |||||||| ||||| || || || | | ||| | Sbjct 886344 GAATACACCAGCAGCGACGAGGTGGCCGTCTGCAACCTGGCCTCCATCGCGCTCAACATG 886285 Query 8419 TTCGTTGATCGACGCTCAA--ACACTTACGACTTTGAACAATTGAAAAACGCCGTG--CA 8474 | ||| || | | | ||| | |||| || |||| | ||||||| || Sbjct 886284 TACGT-----CACCCCCGAGTGCACCTTCGAC-TTCCACAA--GCTGGCCGCCGTGACCA 886233 Query 8475 A-GTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAG 8533 | ||| ||| | || | | ||||| || |||| | || || || || | Sbjct 886232 AGGTGGTGGTCAGAAACCTGAACAAGATCATCGACATCAACTACTACCCGGTGCCCGAGG 886173 Query 8534 -CGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGAC 8592 || ||| || |||| ||||||| | ||| | || | ||||| || || ||||| ||| Sbjct 886172 CCGAGCG-CTCCAACAGGCGCCACCGGCCCATCGGGATCGGCGTCCAGGGGCTGGCGGAC 886114 Query 8593 GCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAA 8652 || || | | ||||| ||| | ||| |||| || || | |||| |||| | Sbjct 886113 GCCTTCATCCTCATGCGCTACCCGTTCGAGAGCCCCGAGGCTCAGCTGCTGAACACCCAG 886054 Query 8653 ATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTG 8712 || || || | || |||| || | || |||||||| || || ||| || || Sbjct 886053 ATCTTCGAGACCATCTACTACGCGGCCCTGGAGGCCAGCTGCCAGCTGGCCGCCGAGCTG 885994 Query 8713 GGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATG 8772 ||| | ||||| |||| |||| ||| | |||| || | | || ||||||||| Sbjct 885993 GGCCCCTACGAGAGCTACGAGGGCTCCCCCGTCAGCAAGGGCGTCCTCCAGTACGACATG 885934 Query 8773 TGGAATGTCACGCCCACCTCTTTGTGGAATTGG-AGCGATTTGAAACGCAAAATTGCTCA 8831 ||| ||||||||| ||||| | ||| ||| | |||| | || || | Sbjct 885933 TGGGGGAAGACGCCCACCGAGCTGTGGGACTGGCAGC-AGCTGAAGGAGAGGATCGCCCG 885875 Query 8832 ATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAAT 8891 ||| || | || ||| | |||| ||||||||||||| | || || || || Sbjct 885874 GCACGGCGTGAGGAACAGCCTGCTCCTGGCCCCCATGCCCACCGCCTCCACCGCCCAGAT 885815 Query 8892 AATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937 |||| |||||||| ||| | ||| | | ||||| |||| | ||| Sbjct 885814 CCTGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTAC 885769 >seq14557 Length=1650391 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || | ||||| || ||||| || ||||| ||||| || |||||||||||| Sbjct 90826 CCACCCCTCAATCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 90885 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | ||||||||| || || Sbjct 90886 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 90945 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | |||||| | ||||| Sbjct 90946 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 91005 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || |||||||| || || | || || ||||| || ||||| Sbjct 91006 TCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 91052 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || || |||| || ||||| || ||||| || || || |||||||||||| Sbjct 91054 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 91113 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | ||||||||| || || Sbjct 91114 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 91173 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCAC 134665 |||||||| || || || || || || | || ||||| |||| | ||||| Sbjct 91174 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCAATGTTGTCACTGGGCTCCAC 91232 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || |||||||| || || | || || ||||| || ||||| Sbjct 91233 CTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 91280 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || || |||| || ||||| || ||||| || || || |||||||||||| Sbjct 91282 CCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 91341 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | ||||||||| || || Sbjct 91342 AGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGA 91401 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | |||||| | ||||| Sbjct 91402 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACC 91461 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| |||||||| || || | || || || || || ||||| Sbjct 91462 TCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 91508 >seq14703 Length=1421099 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 |||||| ||||| | |||| ||||| || | |||||||||||| ||||| ||||| || Sbjct 453306 CGCCATCATCGAGTCCCAAACGGAAACAGGCACGCCGTACATGCTCTACAAGGACGCCTG 453365 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 |||| || ||||| || ||| |||||||||| | |||||||| |||||| | || Sbjct 453366 CAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAGATGCAGCAACCTGTGCACGGA 453425 Query 8352 AATTGTACAGTACA 8365 || ||| | |||| Sbjct 453426 GATCGTAGAATACA 453439 >seq18908 Length=594 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/207 (70%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGG-ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAG 134566 ||||| || |||| | || || || |||||||||||| | |||| | || || || Sbjct 581 AGGTGCAGGGTGGCACTCTTTCTGCATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAG 522 Query 134567 CTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAAT 134626 ||| ||||| ||||| |||| | ||||||||| || || |||||||| || || || || Sbjct 521 CTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGAT 462 Query 134627 TTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACC 134686 || || || || | |||||| | ||||| || ||||| |||||||| || Sbjct 461 CTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTTTTGCC 402 Query 134687 GGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || || || ||||| Sbjct 401 AGTGAGGGTCTTGACAAAGATCTGCAT 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505235579587960