Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq14537 253 3e-62 seq14703 87.8 2e-12 >seq14537 Length=2063196 Score = 253 bits (280), Expect = 3e-62 Identities = 1002/1571 (64%), Gaps = 9/1571 (1%) Strand=Plus/Plus Query 68653 TTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTA 68712 ||||| || || || ||||||| |||||||| | | | || || || || || Sbjct 885674 TTCTTCATGTCCTCGTTCCACAGGCCCCTCTCCGTCAGGTCCTTGAGCAGGTGGGGGTTG 885733 Query 68713 ACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 68772 || || || || ||||| || | ||| || || ||||| || || ||||| || | || Sbjct 885734 ACGATCTGGAACTCCCCCGACAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCG 885793 Query 68773 ACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAAT 68832 | || || || || ||||| || || || || || || || ||||| || |||| | Sbjct 885794 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATGGGGGCCAGGAGC 885853 Query 68833 AAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGA 68892 | || || || | || || ||| | || || || || | ||| ||||| || Sbjct 885854 AGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCTCCTTCAGCTGCTGCCAGTCCCACAGC 885913 Query 68893 TCAGATGGTACAACATTCCAAAGAT--CGTATTGTAGAATTCCGTTACTTGCATATGATC 68950 || | || | | | || | || |||| || || | || || || | || | Sbjct 885914 TCGGTGGG--CGTCTTCCCCCACATGTCGTACTGGAGGACGCCCTTGCTGACGGGGGAGC 885971 Query 68951 CATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCAC 69010 | | || | || || || || || | || || | || || ||||| | || Sbjct 885972 CCTCGTAGCTCTCGTAGGGGCCCAGCTCGGCGGCCAGCTGGCAGCTGGCCTCCAGGGCCG 886031 Query 69011 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATG 69070 |||| || || || ||||| |||| | || || || || || | || ||||| | Sbjct 886032 CGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGAGCCTCGGGGCTCTCGAACG 886091 Query 69071 GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130 | || | | || || || || || |||| ||||| || || || ||||| || | | Sbjct 886092 GGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACGCCGATCCCGATGGGCCGGT 886151 Query 69131 GTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 69190 | | | | || || | || || || || | || || || || || || || || || | Sbjct 886152 GGCGCCTGTTGGAGCGCTCGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATGATCTTGT 886211 Query 69191 TAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCA- 69249 | || |||| ||| || || || |||| | || ||| | || || || || || Sbjct 886212 TCAGGTTTCTGACCACCACCTTGGTCACGGCGGCCAGCTTGTGGAAGTCGAAG-GTGCAC 886270 Query 69250 TCTA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306 || | || |||| || || || | || || || || || || || ||||| | Sbjct 886271 TCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCG 886330 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366 | | |||| | ||||| || || || || || | |||||| || ||||| || Sbjct 886331 CTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCTTTTGATGGTGCCCAGGTTC 886390 Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426 ||||| || ||||| |||| |||||||| ||||| || || |||| || || ||||| Sbjct 886391 TGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGGGTGCCGGTTTCC 886450 Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGC 69486 |||| || ||||| || | | ||| || | || || | ||| |||| || Sbjct 886451 GTCTGGGACTCGATGATGGCGTGCCACACCTGCTGGGCCTTCACCACGCGCTTGACGCGG 886510 Query 69487 TTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAAT 69546 ||| || || || || || ||| || || || || ||||| || | ||| Sbjct 886511 CCCTCCTTCTCGTAGGAGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTTCAAG 886570 Query 69547 CCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATA 69606 || || ||||| | |||||||||| ||||| | | | || || | ||||| Sbjct 886571 CCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTCATG 886630 Query 69607 AATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 || | ||||| ||||| || || || || || |||| ||| | || || || || Sbjct 886631 AACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCTGGCTCTCTGCTCCTCCTTCCCC 886690 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 || || || || || || || || || | | || | ||||| || || || || || Sbjct 886691 GTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAAGTGCCAGGGCTCCAGGTACATG 886750 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | | | || || || || || |||||||| || | ||| | || ||||| || || Sbjct 886751 GCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAA 886810 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 ||||||||||| || | | || || || | || || || || | || ||||| || Sbjct 886811 ACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTTGGTGCCGGCGATGTAACTCCCC 886870 Query 69847 CTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 | || || || || | | | || || || || ||| || ||||| || || Sbjct 886871 GTGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCCGGCCGACTTGGAGATGAGCGCG 886930 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 || | || | ||||| || || ||||| ||||| || || ||||| || || || Sbjct 886931 CACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAG 886990 Query 69967 CAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 ||||| |||| || | | | || || || || || | || || || ||||| ||| Sbjct 886991 CAGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTG 887050 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGA 70086 ||||| || || || ||||| ||||| ||||| || || | || || || || || Sbjct 887051 AACCACTTCTCCGACAGCAGGTTGTAGGTTTCGATGGCCGCGTCGATGTCGTTTTGGTGG 887110 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 || || | | ||| | ||||| ||| ||||| || || || || ||| || || Sbjct 887111 ATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTGATC 887170 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206 |||| |||||| || ||||| || || || || || ||||||| ||||| || | Sbjct 887171 TTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTACGAAAAATCGCGG 887230 Query 70207 TCGTAAATAAT 70217 ||||| || || Sbjct 887231 TCGTAGATGAT 887241 >seq14703 Length=1421099 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 69316 TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTA 69375 |||| || ||||| || || || || || ||| |||| || ||||| || ||||| || Sbjct 453437 TATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGATGGTGCCCAGGTTCTGCTGGTTG 453378 Query 69376 CTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 69435 ||||| |||| |||||||||||||| || || |||| || || ||||| | || || Sbjct 453377 CTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTGCCTGTTTCCGTTTGGGAC 453318 Query 69436 TCGATAAT 69443 ||||| || Sbjct 453317 TCGATGAT 453310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686687503743720