Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq14645 93.3 3e-14 >seq14645 Length=282200 Score = 93.3 bits (102), Expect = 3e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 77434 ACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTG 77493 ||| |||||||||||| ||||||||||||||| |||||||||||||| || | ||||| Sbjct 219671 ACCGTTGATGGTGAACTTGCTGTCTGTGTAGAGAACCAGCTTCTTGATGTTCTGCTCCTT 219612 Query 77494 AGCTTGTTGCAGTGCTTTGGATGCAGCCTGG 77524 || ||| ||| ||| || | ||||||||| Sbjct 219611 GGCCAGTTCCAGCGCTCTGCAGGCAGCCTGG 219581 Score = 93.3 bits (102), Expect = 3e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 77434 ACCATTGATGGTGAACATGCTGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTG 77493 ||| |||||||||||| ||||||||||||||| |||||||||||||| || | ||||| Sbjct 227934 ACCGTTGATGGTGAACTTGCTGTCTGTGTAGAGAACCAGCTTCTTGATGTTCTGCTCCTT 227875 Query 77494 AGCTTGTTGCAGTGCTTTGGATGCAGCCTGG 77524 || ||| ||| ||| || | ||||||||| Sbjct 227874 GGCCAGTTCCAGCGCTCTGCAGGCAGCCTGG 227844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 77295 GTCCTGG-GATGTGCAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATA 77353 |||||| |||| || |||||| || |||||| | || || | ||||||||| | Sbjct 219877 GTCCTGCAGATGCTCACCCAGACCACGTCCAGCCCTGCGTTCAGCCGCTCCAGCTTCTCA 219818 Query 77354 AAGTCATCCTTGTTGACAACTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAG 77413 ||||| || |||||| || || ||||| | |||||||||| |||| |||||||| Sbjct 219817 AAGTCTTCTTTGTTGGTGACGGAACCTCCAGATTTCAGCCTCCAGTTGTTCAGCTTCCAG 219758 Query 77414 TTCTTAACCCACTTAGTCACACC 77436 ||||| ||||| |||||||| Sbjct 219757 TTCTTCACCCAGCAGGTCACACC 219735 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 77295 GTCCTGG-GATGTGCAGCCAGACAACCTCCAGCTCCAAATTGAGTTGGTCCAGCTTCATA 77353 |||||| |||| || |||||| || |||||| | || || | ||||||||| | Sbjct 228140 GTCCTGCAGATGCTCACCCAGACCACGTCCAGCCCTGCGTTCAGCCGCTCCAGCTTCTCA 228081 Query 77354 AAGTCATCCTTGTTGACAACTGACCCTCCGCCATGCAGCCTCCAGCCGTTCTGCTTCCAG 77413 ||||| || |||||| || || ||||| | |||||||||| |||| |||||||| Sbjct 228080 AAGTCTTCTTTGTTGGTGACGGAACCTCCAGATTTCAGCCTCCAGTTGTTCAGCTTCCAG 228021 Query 77414 TTCTTAACCCACTTAGTCACACC 77436 ||||| ||||| |||||||| Sbjct 228020 TTCTTCACCCAGCAGGTCACACC 227998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397331155716865