Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq20551 188 3e-43 seq24796 168 2e-37 seq19352 136 1e-27 seq20677 109 2e-19 seq19049 105 2e-18 seq23388 104 9e-18 seq24571 98.7 4e-16 seq24528 96.9 1e-15 seq15343 89.7 2e-13 seq17513 84.2 8e-12 >seq20551 Length=558 Score = 188 bits (208), Expect = 3e-43 Identities = 109/111 (98%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 22123 aaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC-ATTAAGCATTCTGCC 22181 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 112 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAACTCCATTAAGCATTCTGCC 53 Query 22182 GACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 22232 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 52 GACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT 2 >seq24796 Length=630 Score = 168 bits (186), Expect = 2e-37 Identities = 123/139 (88%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 22124 aTTACGCCCC-GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 22182 |||||||||| ||||||||||||||| | ||||| |||||||| |||| |||||||||| Sbjct 492 ATTACGCCCCCGCCCTGCCACTCATCCGAATACTGCTGTAATTCCTTAAACATTCTGCCG 551 Query 22183 ACATGGAA-GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTT 22241 |||||||| ||||| |||| |||||||||||||||||||||||||| |||| |||||| Sbjct 552 ACATGGAACCCCATCCCAAAACGCATGATGAACCTGAATCGCCAGCGGGATCAACACCTT 611 Query 22242 GTCGCC-TTGCGTATAATA 22259 ||| || |||||||||||| Sbjct 612 GTCCCCTTTGCGTATAATA 630 >seq19352 Length=890 Score = 136 bits (150), Expect = 1e-27 Identities = 75/75 (100%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 22123 aaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 22182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 75 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 16 Query 22183 ACATGGAAGCCATCA 22197 ||||||||||||||| Sbjct 15 ACATGGAAGCCATCA 1 >seq20677 Length=768 Score = 109 bits (120), Expect = 2e-19 Identities = 60/60 (100%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 22123 aaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 22182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 709 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 768 >seq19049 Length=867 Score = 105 bits (116), Expect = 2e-18 Identities = 60/61 (98%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 22123 aaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 22182 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 807 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTACGCATTCTGCCG 866 Query 22183 A 22183 | Sbjct 867 A 867 >seq23388 Length=2009 Score = 104 bits (114), Expect = 9e-18 Identities = 91/112 (81%), Gaps = 1/112 (1%) Strand=Plus/Plus Query 22114 CCTTaaaaaaaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGC 22173 ||||||||||||||| ||| |||| ||||||||| || |||| || ||||||||||| | Sbjct 1445 CCTTAAAAAAATTACTCCCT-CCCTCCCACTCATCTCACTACTCTTCTAATTCATTAAAC 1503 Query 22174 ATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA 22225 ||||| || |||| || ||||||||||| ||| | ||||| |||| ||| Sbjct 1504 ATTCTCCCTACATACAACCCATCACAAACCCCATCTTAAACCTCAATCCCCA 1555 >seq24571 Length=1128 Score = 98.7 bits (108), Expect = 4e-16 Identities = 54/54 (100%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 22123 aaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT 22176 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1075 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATT 1128 >seq24528 Length=839 Score = 96.9 bits (106), Expect = 1e-15 Identities = 53/53 (100%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 22123 aaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT 22175 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 53 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT 1 >seq15343 Length=468 Score = 89.7 bits (98), Expect = 2e-13 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 22123 aaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA 22174 |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 52 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGCAATTCATTAAGCA 1 >seq17513 Length=879 Score = 84.2 bits (92), Expect = 8e-12 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 22123 aaTTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAA 22171 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 831 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGGTGTAATTCATTAA 879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184388349862014