Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq14537 152 6e-32 seq14703 84.2 3e-11 >seq14537 Length=2063196 Score = 152 bits (168), Expect = 6e-32 Identities = 945/1492 (63%), Gaps = 44/1492 (3%) Strand=Plus/Plus Query 110614 CTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGAC 110673 |||||| |||| | ||| || || ||| | | ||||| |||| ||||| |||||| Sbjct 885676 CTTCATGTCCTCGTTCCACAGGCCCCTCTCCGTCAGGTCCTTGAGCAGGTGGGGGTTGAC 885735 Query 110674 AATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAA 110733 || ||||| || | || || | | ||||||||| | ||||| | || | Sbjct 885736 GATCTGGAACTCCCCCGACAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCGAT 885795 Query 110734 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 110793 | | || || || |||| ||| || ||||||||||| || ||||| || |||| | || Sbjct 885796 GGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATGGGGGCCAGGAGCAG 885855 Query 110794 ACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAG 110853 ||||| | | || | | ||| | ||||| || | |||||| | || Sbjct 885856 GCTGTTCCTCACGCCGTGCCGGGCGATCCTCTCCTTCAGCTGCTGCCAGTCCCAC---AG 885912 Query 110854 CTTGGTTT-CACCTTCCC--ACATGTCAAACTGAAGCAC-CCCTTGG-GACGCGGGAGAA 110908 || ||| | |||||| ||||||| |||| || || |||||| |||| ||||| Sbjct 885913 CTCGGTGGGCGTCTTCCCCCACATGTCGTACTGGAGGACGCCCTTGCTGACGGGGGAG-- 885970 Query 110909 CCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGAT 110968 ||||| || | || |||| || | | | |||| | ||||| |||||||||| Sbjct 885971 CCCTCGTAGCTCTCGTAGGGGCCCAGCTCGGCGGCCAGCTGGCAGCTGGCCTCCAGGGCC 886030 Query 110969 GCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAAT 111028 |||| || ||||| || ||||| | | |||| | || || || || || Sbjct 886031 GCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGAGCCTCGGGGCTCTCGAAC 886090 Query 111029 GCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTG 111088 | |||||| | || || | ||||| || || || || || | || || || | | Sbjct 886091 GGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACGCCGATCCCGATGGGCCGG 886150 Query 111089 TGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACT 111145 || ||| | || || ||| | | ||| || || || | || |||| |||| Sbjct 886151 TGGCGCCTGTTGGAG---CGCTCGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATGATC 886207 Query 111146 CGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTG 111205 ||| || ||| || || | ||| || | | || || | | || || ||| Sbjct 886208 TTGTTCAGGTTTCTGACCACCACCTTGGTCACGGCGGCCAGCTTGTGGAAGTCGAAGGTG 886267 Query 111206 CGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTC 111265 | ||| |||| ||| | || ||||| || |||| ||||| || ||| | Sbjct 886268 CA---CTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGGTTGCAGACGGCCACC 886324 Query 111266 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCC 111325 || || | ||||| || | || || || || | |||| || || || || ||| Sbjct 886325 TCGTCGCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCTTTTGATGGTGCCC 886384 Query 111326 AAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 111385 | |||| ||||| |||||| ||||||| || || |||||||||||||| || || || Sbjct 886385 AGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGGGTGCCG 886444 Query 111386 GTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCTGGTACAATGGCGTTG 111445 || |||||||| || | || || || | ||| || | ||| || | | ||| Sbjct 886445 GTTTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGCTGGGCCTTCACCACGCGCTTG 886504 Query 111446 GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTC 111504 | || |||||| |||||| |||||||| ||||||||||| ||| | || || Sbjct 886505 ACGCGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTCTCAAACTCCTC-CCCCCAGCACTC 886563 Query 111505 GGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCTT--CCTCAAC 111561 | | | | || || || ||| ||||| | |||||||| | || || ||| || Sbjct 886564 GTTCA-AGCCGGGGCATTCGTCCGGACACATCAGAGACCA--GTCCTGGTTGCTCTCCAC 886620 Query 111562 CCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT-ACACCGAGCCT 111620 || ||||||||| | ||| || ||||| || | | || || || || | | || Sbjct 886621 CCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCTGGCTCTCTGCTC 886680 Query 111621 CTTCGTCACCTTGGT-TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 111679 || | || || || | | || | ||| ||||| || | || || |||||| ||| Sbjct 886681 CTCCTTCCCCGTGTTCTTCTTC--AGCTCCAGGAAGTCAAAGACGTCGAAGTGCCAGGGC 886738 Query 111680 TCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCT 111736 || || || | |||| | || || ||| | || | || ||||| || Sbjct 886739 TCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACGTAGCGTGCC 886798 Query 111737 GTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGA 111796 ||| ||| | || | ||||| || | | || | || || || || || || Sbjct 886799 GTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTTGGTGCCGGCG 886858 Query 111797 ATACGAGATTTATTGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCCCACT 111854 || | |||||| | || | || | || || || ||||| ||| ||| Sbjct 886859 ATGTAACTCCCCGTGGCTCGGATGCAGC--TGACGGCCACGCCGATGCCCCCGGCCGACT 886916 Query 111855 TTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGT 111914 | ||||| |||| |||| | | || || | || || || | ||| ||| ||||| Sbjct 886917 TGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCGTCCTTCA 886976 Query 111915 TGGCGATAAGGAAGCAACTGGACATCTGCGGTC--TTGGTGTACCAGCATTGAAGAGGGT 111972 |||| | |||||||| ||||||| |||||| | |||||| || || |||||||| || Sbjct 886977 TGGCCAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTTGGTG--CCTGCGTTGAAGAGCGT 887034 Query 111973 TGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAAT 112031 || | ||||| ||||| || | | |||| | || ||| || || | | | | | Sbjct 887035 GGGCGAGGCGTGGGTGAAC-CACTTCTCCGACAGCAGGTTGTAGGTTTCGATGGCCGCGT 887093 Query 112032 CAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 | ||||| | ||||||||||| | ||||| ||| | ||||| ||| || Sbjct 887094 CGATGTCGTTTTGGTGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGG 887145 >seq14703 Length=1421099 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 ||| ||||| ||||| |||| || || || || | |||| | | || || || Sbjct 453453 CTCGTCCTTGCTGGTGTATTCTACGATCTCCGTGCACAGGTTGCTGCATCTGATGGTGCC 453394 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || |||| ||||| |||||| ||||||| || ||||||||||||||||| ||||| || Sbjct 453393 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGTGCC 453334 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGC--GGCTGGTACAATGGCG 111442 || ||||| || || | || || || | || ||| | || ||| || | | Sbjct 453333 TGTTTCCGTTTGGGACTCGATGATGGCGTACC--ACAGCTGCTGGGCCTTCACCACGCGT 453276 Query 111443 TTGGCCCGTCCCTCCGCCTCGTAC 111466 ||||| || |||||| ||||||| Sbjct 453275 TTGGCTCGGCCCTCCTTCTCGTAC 453252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627829671640800