Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14537 123 3e-23 seq7053 84.2 3e-11 seq3173 84.2 3e-11 >seq14537 Length=2063196 Score = 123 bits (136), Expect = 3e-23 Identities = 884/1402 (63%), Gaps = 48/1402 (3%) Strand=Plus/Minus Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAA--GACCCCAAATGTCC 104371 ||||| ||||| | || || |||||||| || || |||||| | || || ||||| Sbjct 887053 GTTCACCCACGCCTCGCCCACGCTCTTCAACGCAGG--CACCAACCGGCCGCAGCTGTCC 886996 Query 104372 AGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACG 104431 || |||||||| | |||| ||||| ||| ||| | || || || | || || | | Sbjct 886995 AGCTGCTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATTTACGACACGCTCAAG 886936 Query 104432 GAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATG--TGA 104489 |||| |||| ||||| |||| ||| ||||| || || || | || | || | Sbjct 886935 CAGTGCGCGCTCATCTCCAAGTCGGCCGGGGGCATCGGCGTGGCCGTCA--GCTGCATCC 886878 Query 104490 GAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGC 104549 |||||| | || || || || || || || | || | | || |||| Sbjct 886877 GAGCCACGGGGAGTTACATCGCCGGCACCAACGGCCACTCCAACGGCCTGGTGCCCATGC 886818 Query 104550 TTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGAT 104606 | | || | ||| ||| || ||||| || | || | ||| || || Sbjct 886817 TGAGAGTTTACAACAACACGGCACGCTACGTGGACCAGGGAGGGAACAAGCGGCCCGGCG 886758 Query 104607 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 104666 | |||| | || || ||||| |||||| || || | || ||||| ||| || Sbjct 886757 CCTTCGCCATGTACCTGGAGCCCTGGCACTTCGACGTCTTTGACTTCCTGGAGCTGAAGA 886698 Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTG---CCGCGATCTCTTCTCCGCTCTCTGGATTC 104723 ||| | || || |||||| || | | | | || || |||| ||| |||||||| | Sbjct 886697 AGAAC-ACGGGGA--AGGAGGAGCAGAGAGCCAGGGACCTGTTCTACGCGCTCTGGATCC 886641 Query 104724 CAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT---TGGTCTCTCTTTTGTCCAG 104780 | || | ||||||||||| || |||||| | | |||||||| | ||||| | Sbjct 886640 CCGACTTGTTCATGAAGAGGGT---GGAGAGCAACCAGGACTGGTCTCTGATGTGTCCGG 886584 Query 104781 AC-AAGGCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAA 104838 || || || || | | | ||| ||| | ||| ||||||||||| || ||||| Sbjct 886583 ACGAATGCCCCGGCT-TGAACGAGTGCTGGGGG-GAGGAGTTTGAGAAGCTCTACACCTC 886526 Query 104839 GTACGAGGAAGAAGGTCGGG-CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTA 104897 |||||| | || || || | | | ||| |||| || | |||||| | || | Sbjct 886525 CTACGAGAAGGAGGGCCGCGTCAAGCGCGT-GGTGAAGGCCCAGCAGGTGTGGCACGCCA 886467 Query 104898 TTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACC 104957 | || |||| || || || || || || || |||||||| |||||||||||||| ||| Sbjct 886466 TCATCGAGTCCCAGACGGAAACCGGCACCCCGTACATGCTCTACAAAGACGCCTGCAACA 886407 Query 104958 AAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCT 105017 ||||| || || |||| |||| ||||| || ||| || || || || ||| Sbjct 886406 GGAAGAGCAACCAGCAGAACCTGGGCACCATCAAAAGCAGCAACCTGTGCACGGAGATCG 886347 Query 105018 TGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCA 105077 |||||| || || || ||| ||| || || ||||| || || ||||| ||| || Sbjct 886346 TGGAATACACCAGCAGCGACGAGGTGGCCGTCTGCAACCTGGCCTCCATCGCGCTCAACA 886287 Query 105078 AGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAA 105137 ||| || || ||| || || || | | || || || || || || Sbjct 886286 TGTACGTCACCCCCGAG---TGCACCTTCGACTTCCACAAGCTGGCCGCCGTGACCAAGG 886230 Query 105138 CTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTG 105194 || || |||||| |||| | || || | || | ||||| || ||| | | Sbjct 886229 TGGTGGTCAGAAACCTGAACAAGATCATCGACATCAACTACTACCCGGTGCCCGAGGCCG 886170 Query 105195 CTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG 105254 || || || | | | ||||| || || || |||| || ||||| || ||||| | Sbjct 886169 AGCG---CTCCAACAGGCGCCACCGGCCCATCGGGATCGGCGTCCAGGGGCTGGCGGACG 886113 Query 105255 TATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCA 105314 ||||| || ||| || | || || | ||| || || | || | | | Sbjct 886112 CCTTCATCCTCATGCGCTACCCGTTCGAGAGCCCCGAGGCTCAGCTGCTGAACACCCAGA 886053 Query 105315 TATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATG 105374 | || |||||||| || |||| || || ||||| || | || |||| | | | Sbjct 886052 TCTTCGAGACCATCTACTACGCGGCCCTGGAGGCCAGCTGCCAGCTGGCCGCCGAGCTGG 885993 Query 105375 GTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGG-GTGCTTCAATTTGATAT 105432 | || || || | || ||||| |||| | ||| |||||| || || || | || || Sbjct 885992 GCCCCTACGAGAGCTACGAGGG--CTCCCCCGTCAGCAAGGGCGTCCTCCAGTACGACAT 885935 Query 105433 GT--GGGAAGGTG-AGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAA 105489 || |||||| | ||| |||| | |||||| | || ||||| | ||| Sbjct 885934 GTGGGGGAAGACGCCCACCGAGCT---GTGGGACTGGCAGCAGCTGAAGGAGAGGATCGC 885878 Query 105490 GGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACA 105549 | | || | | ||||| || ||| |||| || ||||| || ||||||||||| || Sbjct 885877 CCGGCACGGCGTGAGGAACAGCCTGCTCCTGGCCCCCATGCCCACCGCCTCCACCGCCCA 885818 Query 105550 AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAAC 105609 ||| |||| || || || | | | || ||||||| | |||||||| | | || Sbjct 885817 GATCCTGGGCAACAACGAGTCCATCGAGGCCTACACCAGCAACATCTACACGCGCAGGGT 885758 Query 105610 CCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGG 105669 || |||| ||||| ||| |||||| || || | | ||||| | |||| || Sbjct 885757 GCTGTCGGGGGAGTTCCAGATCGTCAACCCCCACCTGCTCAAGGACCTGACGGAGAGGGG 885698 Query 105670 TCTCTGGTCCAAGGATATGAAG 105691 || ||| | |||| |||||| Sbjct 885697 CCTGTGGAACGAGGACATGAAG 885676 >seq7053 Length=111041 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||| || ||||| ||| || | ||||| ||||||||||| Sbjct 46861 GTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCTGGCTGAAGAAGCGAGGC 46920 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 46921 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGAGACGAGG 46969 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||| || ||||| ||| || | ||||| ||||||||||| Sbjct 51750 GTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCTGGCTGAAGAAGCGAGGC 51691 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 51690 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGAGACGAGG 51642 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||| || ||||| ||| || | ||||| ||||||||||| Sbjct 60671 GTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCTGGCTGAAGAAGCGAGGC 60612 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 60611 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGAGACGAGG 60563 >seq3173 Length=1876 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 94887 || ||||| ||||||||||| || ||||| ||| || | ||||| ||||||||||| Sbjct 456 GTGGAGGGAATCTTCTTCTCGGGCTCCTTTGCCGCCATCTTCTGGCTGAAGAAGCGAGGC 397 Query 94888 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 || ||||| || || ||||||||||||||| ||| | ||||||| Sbjct 396 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCAGCAGAGACGAGG 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583072895242520