Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq14537 259 7e-64 seq14703 87.8 2e-12 >seq14537 Length=2063196 Score = 259 bits (286), Expect = 7e-64 Identities = 1241/1959 (63%), Gaps = 19/1959 (1%) Strand=Plus/Plus Query 77061 TTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTA 77120 ||||| || || || ||||||| |||||| || | | | || || || || || Sbjct 885674 TTCTTCATGTCCTCGTTCCACAGGCCCCTCTCCGTCAGGTCCTTGAGCAGGTGGGGGTTG 885733 Query 77121 ACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCC 77180 || || || || || || |||| || || || ||||| || || ||||| || | || Sbjct 885734 ACGATCTGGAACTCCCCCGACAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCCTCG 885793 Query 77181 ACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAAT 77240 | || || ||||| |||| || || || || || || || ||||| || |||| | Sbjct 885794 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATGGGGGCCAGGAGC 885853 Query 77241 AAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 | || || || | || || ||| | || || || | | ||| ||||| || Sbjct 885854 AGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCTCCTTCAGCTGCTGCCAGTCCCACAGC 885913 Query 77301 TCTGAAGGTACAACATCCCAAAGAT--CGTATTGTAGAATTCCGTTACTAGCATATGATC 77358 || | || | | |||| | || |||| || || | || || || | || | Sbjct 885914 TCGGTGGG--CGTCTTCCCCCACATGTCGTACTGGAGGACGCCCTTGCTGACGGGGGAGC 885971 Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTT--CAGCTAGTTCACAACTCGCTTCCAATGC 77416 | | || | || || || || | | | | || || | || || || |||| || Sbjct 885972 CCTCGTAGCTCTCGTAGGGGCC--CAGCTCGGCGGCCAGCTGGCAGCTGGCCTCCAGGGC 886029 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476 |||| || || || ||||| |||| | || || || || || || || || Sbjct 886030 CGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGAGCCTCGGGGCTCTCGAA 886089 Query 77477 CGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCT 77536 ||| || | | || || ||||| || || | ||||| || || || || || || | Sbjct 886090 CGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACGCCGATCCCGATGGGCCG 886149 Query 77537 ATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTT 77596 || | | | ||||| | || || || | || || || || ||||| || || || Sbjct 886150 GTGGCGCCTGTTGGAGCGCTCGGCCTCGGGCACCGGGTAGTAGTTGATGTCGATGATCTT 886209 Query 77597 ATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCC 77656 || || ||||| || || || || |||| | || || | || || || | | Sbjct 886210 GTTCAGGTTTCTGACCACCACCTTGGTCACGGCGGCCAGCTTGTGGAAGTCGAAGGTGCA 886269 Query 77657 ATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATT 77713 || | || ||||||| | || || || || || || || || || ||||| | Sbjct 886270 CTCGGGGGTGACGTACATGTTGAGCGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTC 886329 Query 77714 AGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATT 77773 | ||| |||| | ||||| || || || || || | |||||| |||||||| || Sbjct 886330 GCTGCTGGTGTATTCCACGATCTCCGTGCACAGGTTGCTGCTTTTGATGGTGCCCAGGTT 886389 Query 77774 TTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTC 77833 || ||||||||||| | ||||| | ||| || || || || |||| || |||||||| Sbjct 886390 CTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTAGAGCATGTACGGGGTGCCGGTTTC 886449 Query 77834 AATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTAT 77891 |||| || ||||| || | | ||| || || || || || | || ||| Sbjct 886450 CGTCTGGGACTCGATGATGGCGTGCCACAC--CTGCTGGGCCTTCACCACGCGCTTGACG 886507 Query 77892 CGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCC 77951 || | ||| | || || || || ||| ||||| || || ||||| || | | Sbjct 886508 CGGCCCTCCTTCTCGTAGGAGGTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCGTTC 886567 Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011 || || |||||||| | || ||||||| |||||||| | || || | ||| Sbjct 886568 AAGCCGGGGCATTCGTCCGGACACATCAGAGACCAGTCCTGGTTGCTCTCCACCCTCTTC 886627 Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071 || || | || || ||||| || || || || || | || ||| || || || || Sbjct 886628 ATGAACAAGTCGGGGATCCAGAGCGCGTAGAACAGGTCCCTGGCTCTCTGCTCCTCCTTC 886687 Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131 || || ||||| || || || || || || | | || | ||||| || || || || Sbjct 886688 CCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAAGACGTCGAAGTGCCAGGGCTCCAGGTAC 886747 Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191 || || | | || || || || || |||||||| || | || | || ||||| || Sbjct 886748 ATGGCGAAGGCGCCGGGCCGCTTGTTCCCTCCCTGGTCCACGTAGCGTGCCGTGTTGTTG 886807 Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTT 78251 |||||||||| ||| || | | ||||| || || || || || | || ||||| Sbjct 886808 TAAACTCTCAGCATGGGCACCAGGCCGTTGGAGTGGCCGTTGGTGCCGGCGATGTAACTC 886867 Query 78252 CCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGA 78311 || | || || || || | || | || || || || ||| ||| || || || Sbjct 886868 CCCGTGGCTCGGATGCAGCTGACGGCCACGCCGATGCCCCCGGCCGACTTGGAGATGAGC 886927 Query 78312 GCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGA 78371 ||||| | || | || ||||| || ||||| || ||||| ||| ||||| || || Sbjct 886928 GCGCACTGCTTGAGCGTGTCGTAAATGCCCTCGATGCTGTCGTCCTTCATGGCCAGCAGG 886987 Query 78372 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGC 78431 || ||||| |||| || | | || ||||| || || | || || || || || Sbjct 886988 AAGCAGCTGGACAGCTGCGGCCGGTTGGTGCCTGCGTTGAAGAGCGTGGGCGAGGCGTGG 887047 Query 78432 GTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGA 78491 || ||||| || || || || || ||||| ||||| || || | || ||||| ||| Sbjct 887048 GTGAACCACTTCTCCGACAGCAGGTTGTAGGTTTCGATGGCCGCGTCGATGTCGTTTTGG 887107 Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551 || || || || | || | ||||| ||| ||||| || | || || || || Sbjct 887108 TGGATGCCGACGGAGACCCTCATCAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCGTTG 887167 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 78611 || |||| || ||| || |||| || || || || || ||||||| ||||| || Sbjct 887168 ATCTTCAGCAGGTAGGAGCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTACGAAAAATCG 887227 Query 78612 CTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACA 78671 | ||||| || || | || || || ||| ||| | || || |||| | Sbjct 887228 CGGTCGTAGATGATGGCCGAGTTCAGGCGGTCTCTGTTCTGCAGGACGATGTCCA-GCGT 887286 Query 78672 GTAGTT-GAAATAATAGGAGATCGTACACCATTTTTA-GGATTAACATAGTTAAATAAAT 78729 | || || | || || || | |||| ||| | || || || ||||| | | | Sbjct 887287 CTCCTTGGAGACCATGGGGGAGTG-GCACCTGTTTAAGGGGTTGACGTAGTTGTACAGGT 887345 Query 78730 CTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTC 78789 | ||||| || || || || | || || || || ||||| || || || || || || | Sbjct 887346 CCTCCATCACCTCGCTGAACACCTTCTTGGTCTCTTTGTGCAGGTTGGAGACGGCAATCC 887405 Query 78790 TTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCG 78849 ||||| || || || || || || || | || || ||||| | || || |||| Sbjct 887406 GCGCAGCCAGGATGGCGTAGTCGGGGTGCTTGGTGGTCAGGGTGGCGGAGATCTCCGCCG 887465 Query 78850 CTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGG 78909 | | | || | ||| | || |||||||| | || || || || || || ||||||| Sbjct 887466 CCAGCGTGTCCAGCTCCACCGTGGTGACCCCGCTGTACAGACCCTGGATCACCTTCATGG 887525 Query 78910 CGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACGAG 78969 ||| | | || || ||||| |||| ||||| || || || | || || || | Sbjct 887526 TGATCTGAGCCGGGTCCACAAAGTCAGCGTTCAGGCCGTAGCACAGCTTCTGGATGCGGG 887585 Query 78970 ATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 | |||||||| || || || || ||||| || |||| Sbjct 887586 AGGTGATTTTGTCGAACATGACGCGCTCCTGGCGCCCAT 887624 >seq14703 Length=1421099 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 76843 CCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATAT 76902 |||| |||| || || || |||||||| ||||||||| || | || || || || | Sbjct 454822 CCAGCTTCCAGCCATAAAAGTGCATGCTGGTCAGTTTGCCGTAGTTGGGCTCTGCGATGT 454763 Query 76903 GAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAA 76962 | || || | |||||| || ||||||||||| || || | || || ||||| || | | Sbjct 454762 GGATGTTGAGCGACTGGCTCTGATCGATGAAGGCGCCGCGGTCTGCTGCCATCTTGAGGA 454703 Query 76963 TGGTCTTTTGAGGAATTTCCCAAATAGTTTT 76993 |||||| || | |||||||| | |||||| Sbjct 454702 CGGTCTTCTGGGAGATTTCCCACACAGTTTT 454672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694445003762720