Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq17523 297 2e-75 seq16336 284 1e-71 seq15533 255 6e-63 seq15873 147 2e-30 seq770 82.4 8e-11 >seq17523 Length=901 Score = 297 bits (328), Expect = 2e-75 Identities = 230/273 (84%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||| |||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct 870 TCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCTGCTCACTGCAATCTCCG 811 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463 |||||| ||||||| |||||||||||| || ||| ||||||||||||||||||||| Sbjct 810 CCTCCCAGGTTCAACTGCTTCTCCTGCCTCCGCTTCCCGAGTAGCTGGGATTACAGGCAT 751 Query 8464 AAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGG 8523 ||||||| || | ||||||| ||||| |||||||||| || ||||||||||||||| Sbjct 750 GCACCACCACACCCACCTAATTTGTGTATGCTTAGTAGAGACAGCGTTTCACCATGTTGG 691 Query 8524 CCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGC 8583 ||||| ||||||| | |||||| ||| ||||||| || |||| ||||| |||||||| Sbjct 690 CCAGGATGGTCTCAATCTCCTGTCCT--TGTGATCTGCCCACCTCAGCCTCACAAAGTGC 633 Query 8584 TGGGATTACAGGCATGAGCCACCGCGCCTGGCC 8616 ||||||||||||| |||||||| | ||| |||| Sbjct 632 TGGGATTACAGGCGTGAGCCACTGTGCCCGGCC 600 >seq16336 Length=693 Score = 284 bits (314), Expect = 1e-71 Identities = 219/258 (85%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 |||||| |||||||||||| |||||||| |||| |||||||||||||||| ||||| Sbjct 245 CTCTGTCACCCAGGCTGGAGCGCAGTGGCACAATCTTGGCTCACTGCAACCTCCACCTCC 304 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC 8468 ||||||||| || |||||||||||||||| ||||||||||||||||||| | || Sbjct 305 AGGGTTCAAGTGATCCTCCTGCCTCAGCCTCTTGAGTAGCTGGGATTACAGGTGCACACC 364 Query 8469 ACCACGCCAAGCTAAT-TTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAG 8527 || || || |||||| |||||||||||||||||||| ||||||||| ||||||||||| Sbjct 365 ACAACACCTGGCTAATCTTTTGTATTTTTAGTAGAGACAGGGTTTCATTATGTTGGCCAG 424 Query 8528 GCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGG 8587 ||||| |||||||||||||||| |||||| || |||| | ||||||| |||||||| Sbjct 425 ACTGGTATCGAACTCCTGACCTC--GTGATCTGCCCACCTCAGACTCCCAATGTGCTGGG 482 Query 8588 ATTACAGGCATGAGCCAC 8605 |||||||||||||||||| Sbjct 483 ATTACAGGCATGAGCCAC 500 >seq15533 Length=711 Score = 255 bits (282), Expect = 6e-63 Identities = 184/209 (88%), Gaps = 5/209 (2%) Strand=Plus/Minus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 ||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| Sbjct 216 TCTCACTCTGTTGCCCAGGCTAAAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCCG 157 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463 ||||||||||| ||| |||||||||||||||||||| ||||| || ||||||||||| Sbjct 156 CCTCCCGGGTTTAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAACTACGATTACAGGCAC 97 Query 8464 AAGCCACCACGCCAAGCTAA-TTTTTGTA-TTTTTAGTAGAGAGAGGGTTTCACCATGTT 8521 | ||||||| ||| ||||| |||||||| ||||||||||||| |||||||||||||||| Sbjct 96 ATGCCACCATGCCCGGCTAATTTTTTGTATTTTTTAGTAGAGACAGGGTTTCACCATGTT 37 Query 8522 GGCCAGGCTGGTCT---CGAACTCCTGAC 8547 |||| ||||||||| |||||||||||| Sbjct 36 GGCCCGGCTGGTCTCGACGAACTCCTGAC 8 >seq15873 Length=684 Score = 147 bits (162), Expect = 2e-30 Identities = 96/106 (91%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 ||||||||||| |||||||||||||||||||||| ||||||| |||||||||| |||||| Sbjct 157 TCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAGCCTCCG 98 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCT 8449 |||||| ||||||||| ||||||| ||||| |||||| ||||||| Sbjct 97 CCTCCCAGGTTCAAGCGATTCTCCGGCCTCGGCCTCCCAAGTAGCT 52 >seq770 Length=1768 Score = 82.4 bits (90), Expect = 8e-11 Identities = 78/100 (78%), Gaps = 10/100 (10%) Strand=Plus/Plus Query 8512 TCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGC 8571 |||| ||| | ||||||||| ||||||||| | |||||||||||||| || Sbjct 650 TCACTTTGTAGACCAGGCTGGCCTCGAACTCA---------GAGATCCACCTGCCTCTGC 700 Query 8572 CTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCC 8611 ||||||| |||||||||||| |||| || |||||| |||| Sbjct 701 CTCCCAA-GTGCTGGGATTAAAGGCGTGCGCCACCACGCC 739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521319996122200