Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq14557 147 2e-30 seq18908 118 8e-22 >seq14557 Length=1650391 Score = 147 bits (162), Expect = 2e-30 Identities = 178/239 (74%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 44103 ATTTCATT--CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 |||| ||| || || |||| || || || ||||| || ||| |||||| |||||||| Sbjct 90816 ATTTTATTGACCACCCCTCAATCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTT 90875 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| |||| || ||| | || ||||||||||| || |||||||||| | |||||| Sbjct 90876 GTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTG 90935 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGG 44279 ||| | || | |||||||| ||| ||||| |||| | |||| | ||||||||| Sbjct 90936 ATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGC 90994 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||| | || || || || || ||||||||||| |||||||| |||||| Sbjct 90995 TGGGCTCCACCTCAAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 91053 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || || ||||| || ||| ||| || ||||||||||| || Sbjct 91278 CATGCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 91337 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || || |||||||| || |||||||||| | ||||||||| | Sbjct 91338 GGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 91397 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| |||| | |||| | ||||||||| || | Sbjct 91398 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCGCTGGGCT 91456 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| | || || || || || ||||||||||| || ||||| |||||| Sbjct 91457 CCACCTCAAGAGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 91509 Score = 129 bits (142), Expect = 4e-25 Identities = 170/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || || ||||| || ||| ||| || ||||||||||| || Sbjct 91050 CATGCCTCCCCTCAGACGCAGGACAAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 91109 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || || |||||||| || |||||||||| | ||||||||| | Sbjct 91110 GGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGG 91169 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| |||| | |||| | ||| |||| || | Sbjct 91170 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGTTGTCACTGGGCT 91228 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||||| | || || || || || ||||||||||| |||||||| |||||| Sbjct 91229 CCACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACGAAGATCTGCATG 91281 >seq18908 Length=594 Score = 118 bits (130), Expect = 8e-22 Identities = 154/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTG-CTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAG 44190 ||||| || ||| | ||| || || |||||||| |||| || ||| | || || || Sbjct 581 AGGTGCAGGGTGGCACTCTTTCTGCATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAG 522 Query 44191 CTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTAT 44250 |||||| || |||||||||| | ||||||||| | || | |||||||| ||| || Sbjct 521 CTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGAT 462 Query 44251 CTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTC 44309 ||| ||||| |||| | ||||||||| || |||||||| | || || || || | Sbjct 461 CTTGGCCTTCAC-GTTCTCAATGGTGTCGCTGGGCTCCACCTCAAGAGTGATGGTTTTGC 403 Query 44310 CCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||||||||| || ||||| |||||| Sbjct 402 CAGTGAGGGTCTTGACAAAGATCTGCATG 374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359877323977941