Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq14996 150 3e-31 seq15039 127 3e-24 >seq14996 Length=1273618 Score = 150 bits (166), Expect = 3e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 8282 GGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATA 8341 || |||||||| | | ||||||||| |||| |||| ||| || || || | | Sbjct 185266 GGCACTCGGAAAGACACGTACGGACACCACTTGGTGTTGAGACACACCAGTTTCTCCAAA 185207 Query 8342 GTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTAC 8401 || || |||||| ||| ||| || ||||| |||||||||||||| ||||||||| Sbjct 185206 GTGGCCGTCTTGATGATATTGAAGCCTGTCTCTCCCCCGAAGGTGCTGGGTTTCCAGTAC 185147 Query 8402 CCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCG 8461 |||||||||||||| |||| |||| ||||||||||| |||||||||||||||| || Sbjct 185146 TCCGGGGAGCAGATGGCGTTTCCCATCAGGCCTTTGAGAGAGAACGGAGCCCCCATCTGA 185087 Query 8462 AGAATGCTCTCACCGAAGATG 8482 | |||||||| || |||||| Sbjct 185086 AACATGCTCTCTCCAAAGATG 185066 >seq15039 Length=1367303 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303 || || || | ||||||||| || | ||||| ||| || || || | | |||| Sbjct 1317534 ATCAGCCGCGAGGTCTGGAAAAGCCGTTCGTCGTCCCAGTCGGGGTGAACCTCCTTCAAC 1317593 Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363 || || ||||||| |||||| |||| |||||||| |||||||||||||| || || ||| Sbjct 1317594 ACGTCACACACCCGGTTGTGCTCCCGAAGCCAGATGGTGGCGTACATCATCAGACCCGGT 1317653 Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423 ||||| || || ||||| ||||| ||||| | ||| | |||||| | | |||||| Sbjct 1317654 ACCAGACCGAAGGCCTCGTGACCAACAGCGAAGCGCTCGGATTCGGGAATATGGGGAGGG 1317713 Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACC 9473 || ||| | |||| ||||| || |||| || || |||| ||| || Sbjct 1317714 TATTGCATCTCCACCCCCACGTCCTTCACCGTTGGTGGGTACACTTCTCC 1317763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716645849177920