Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq30562 172 6e-38 >seq30562 Length=7703 Score = 172 bits (190), Expect = 6e-38 Identities = 146/180 (81%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| || |||| ||| |||| |||||| || ||||| | |||||||| |||||||| Sbjct 1718 CTTGAGTCCTGTGATGTGTGCGATCATGTATGTGAGCAGTGCATAGCTGGCGATGTTGAA 1659 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||| || || ||||| || |||||||||||||||||||| || || ||||| ||| | Sbjct 1658 AGGCACTCCGAGGCCCATATCGCCCGAGCGCTGGTACAGCTGACACGACAGCTCACCGTC 1599 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 |||||||||||| || ||| ||||||||||||||| |||||| ||||||||| || Sbjct 1598 GCACACGTAGAACTGACAGAGGGCGTGGCAGGGCGGCAGAGCCATGTAGGGCAGGTCTGC 1539 Score = 105 bits (116), Expect = 8e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 146040 GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTC 146099 |||| | || || ||||||||||||||||| ||||| ||||| || ||||| || ||| Sbjct 711 GTACTCAGCGCCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCGAGGTCGCCCTCCTC 652 Query 146100 CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTT 146159 |||| | |||| | | | |||||||||||||| |||||||| ||||||||| | Sbjct 651 TCTGTCTGTGAACCCGCTCTTGTCCAGGAAGTCCCGGGAGCCGTTGGCATCCCAGATCCT 592 Query 146160 GACGCCCCTCGCGGAGAGCTCATTGG 146185 || || || | |||||||| |||| Sbjct 591 CACCCCTTTCTCCGAGAGCTCCTTGG 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589095340010480