Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq97926 125 6e-24 >seq97926 Length=3727 Score = 125 bits (138), Expect = 6e-24 Identities = 442/681 (65%), Gaps = 26/681 (4%) Strand=Plus/Minus Query 133284 TCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCACC 133343 |||| ||| ||||||||||| || ||||| || || | ||| || ||||| |||| | Sbjct 1941 TCGATAGACTCGTTGTTGCCCAGGATCTGTGCGGTGGACGCTGTCGGCATCGGGGCCATC 1882 Query 133344 AACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCCCAC 133403 |||| | ||| || ||||||| ||| || || || || |||||||||||| Sbjct 1881 AACAGACTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCAC 1822 Query 133404 AGAT-TGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAAATACC 133462 || | ||| || ||| || || | ||| | | || | || || Sbjct 1821 AGGTCTGTCGG------------CGTCTTC----TCCCACATGTCATACTGGAGGATGCC 1778 Query 133463 CCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCCAGCTCGCA 133522 | |||| || ||| | | ||||| || |||| |||| |||||| ||||| Sbjct 1777 CTTGCTGACAGGAGAGCCTTGGTACGTCTCGTAGGCGCCGTGCTCGCGGGCCAGATCGCA 1718 Query 133523 GCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGAT-TGAATAGTTGACGAACCTG- 133580 ||| ||||||| | || |||| ||||| || ||| || || ||||| | | ||| Sbjct 1717 GCTTGCCTCCAGGGAAGCGTAGTAGATGGTCTCGAAGATCTGGAT-GTTGA-GCAGCTGA 1660 Query 133581 GCATCGTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACGCGTCGGCCAAACCCTGTAT 133639 || ||| ||| || ||| | | || | || | || || || |||| || || | Sbjct 1659 GCCTCGGGGCTTTCAAAGGGG-TAACGCATCAGGATGAAGGCATCCGCCAGTCCTTGGAC 1601 Query 133640 GCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGGATAGTG 133699 |||| ||||| || | || || ||| | |||| | |||| | || ||| Sbjct 1600 ACCGATCCCGATTGGCCTGTGACGCTTGTTGGACTTCTCGGCTTCGGGCACTGGGTAGAA 1541 Query 133700 GTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGTTTCAGCAA 133759 ||||| ||| ||||||||||| || || ||||| | ||| |||| | ||| Sbjct 1540 GTTGATGTCAATGATCTTGTTCAGGTTTTTCACGATTACTTTGGTCACGTAGGCCAGTTT 1481 Query 133760 AACATAGTCAAATGTCTTGGCGTCGACGTCGACGCACTTGTTGACGGCAATACTGGCTAG 133819 | ||||||| ||| || | || |||| || |||||| || || || || Sbjct 1480 TTTAAAGTCAAAGGTCC--GCTCAGGGGT-GACGTACATGTTGAGAGCGATGGACGCCAG 1424 Query 133820 ATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGATCTCGGCGCAGAGGTTGCT 133879 |||||| || ||| ||||| || | || | |||||||| | |||||||||||| Sbjct 1423 ATTACAGACCGCCACCTCGTCGTCACTGGTGTATTCAACGATCTCTGTGCAGAGGTTGCT 1364 Query 133880 GCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCTTGTATAG 133939 ||||||||||||||||| ||| | || ||||| | ||||| || ||||| || Sbjct 1363 GCATTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTACAG 1304 Query 133940 CATGTACGGCCCGCCGGTTTC 133960 ||||||||| |||||||| Sbjct 1303 CATGTACGGTGTACCGGTTTC 1283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433126860222904