Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq85215 107 2e-18 >seq85215 Length=7700 Score = 107 bits (118), Expect = 2e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || || ||| ||||||||| |||||||||||| || ||| | || |||| Sbjct 6861 CAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCCA 6802 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || |||||||| ||||||| ||| ||||| ||||| | || || || ||| | Sbjct 6801 GCTGCTTCCCGGCGAAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCTTTATCCTGGA 6742 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | ||| ||| || | | | |||| | ||| ||||| | || || ||||||| Sbjct 6741 TCTTTGCCTTGACGTTTTCAATGGTGTCACTGGGCTCGACCTCTAAAGTGATGGTCTTGC 6682 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 | || || |||||||||||||| ||||| || Sbjct 6681 CAGTGAGGGTCTTCACAAAGATCTGCATTTT 6651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394434509264302