Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq25650 176 3e-39 >seq25650 Length=22773 Score = 176 bits (194), Expect = 3e-39 Identities = 257/358 (72%), Gaps = 4/358 (1%) Strand=Plus/Minus Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858 |||||||| ||| |||||| ||||||| ||| ||||||| |||||| | | ||| Sbjct 10819 CATTTCCCGACCTTCAGCTGCAAGGAGGACTGCAAGATCATCACGGACACAG-CGTCCAA 10761 Query 91859 -CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCT 91917 || || | ||||||||||||||||| ||| |||| || ||||| ||||| || ||||| Sbjct 10760 GCTCGAGCGCAGTGGCTTCTACTGGGGCCCTCTGGGAGTGGAGGACGCACACCGCATGCT 10701 Query 91918 GCGCAACTCGGCACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTT 91977 ||| || | | ||||||||||||||||| ||||| ||||| || || ||||| || || Sbjct 10700 GCGGGACGCTCCTCTGGGCAGCTTTCTCATCCGGGACAGCAGACAGAAAGACGTTTTCTT 10641 Query 91978 CACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG-GACA 92036 ||| |||| || ||| | || |||||| ||||| ||| | || || |||||| | || Sbjct 10640 CACATTGTCCTACCACGCCAAGAGCGGACCGGTCAGCGTGCGCATCGACTACAAGCGGCA 10581 Query 92037 AGCAATTTTCCTTGGCTGGGAGCAAACAGAGGTTTTCATCGGTCCTTCTCCTGTTGGACC 92096 | | || || |||| || | | | | | || | || || || ||| ||||| | Sbjct 10580 A-AAGTTCTCACTGGCGGGCAACGAGCGCACCTTCCCGACGCTCTTTGCCCTCTTGGAGC 10522 Query 92097 ATTACATCGGTGGGCCCAATAATACTTTAGGCATTCCATATATGAAGCGGGTGCAAAC 92154 |||||||| ||||| || | | |||||||||| | ||| ||| || ||| Sbjct 10521 ATTACATCAACTCTCCCAAGAAGAGCCTGAGCATTCCATACAGGAAATGGGAGCCAAC 10464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355655898419986