Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq97926 138 2e-27 >seq97926 Length=3727 Score = 138 bits (152), Expect = 2e-27 Identities = 367/560 (66%), Gaps = 18/560 (3%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||||||| ||| |||||||| || ||||| ||| | ||||| | | |||| Sbjct 881 ACCAACGGCAACTCCAACGGCCTAGTCCCCATGCTGAGAGTTTACAACAACACGGCACGT 940 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||| ||||| || | || || || | ||| | ||| |||| || ||| Sbjct 941 TACGTCGACCAGGGAGGCAACAAGAGACCCGGAGCCTTCGCCATGTACCTGGAGCCGTGG 1000 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||| || || ||||| || | ||| || |||||| | || || ||| | || Sbjct 1001 CACTTTGATGTGTTTGAGTTCTTGGAGCTGAAGAAAAACACAGGGAAGGAGGAGCAAAGA 1060 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT------C 97040 ||||| ||| | || || | || ||| | || || | ||||||||| | || | Sbjct 1061 GCCAGAGACCTTTTCTACGGCCTGTGGATCCCGGACCTCTTCATGAAGAGAGTGGAAAGC 1120 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 ||| | | ||||| || ||||| || || | | || || ||| || ||| Sbjct 1121 AACCAAG------ACTGGTCTCTGATGTGTCCGAACGAGGCTCCTGGGCTGGATGAGTGC 1174 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 ||||| || ||||||||||| ||||| || ||| | |||||||| || | Sbjct 1175 TGGGGGGAGGAGTTTGAGGCGCTCTACACCAAATATGAGAAGGAGGGCCGG---GTCAAG 1231 Query 97161 CGAGTCG---ATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217 || || | | || | |||||||| | ||||| | | | ||| ||| || || Sbjct 1232 CGTGTGGTGAAGGCTCAGCAACTGTGGCACGCCATTATTGAGTCCCAGACAGAAACCGGT 1291 Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGC 97277 || |||||||| || ||||| || || || | || |||||||| | | ||||| Sbjct 1292 ACACCGTACATGCTGTACAAAGACGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGC 1351 Query 97278 ACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACG 97337 |||||||| || ||| || ||||| || || || || ||| || | |||||| | Sbjct 1352 ACCATCAAATGCAGCAACCTCTGCACAGAGATCGTTGAATACACCAGTGACGACGAGGTG 1411 Query 97338 GCAGTTTGCGTTCTGGCATC 97357 || || || |||||| || Sbjct 1412 GCGGTCTGTAATCTGGCGTC 1431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739826614759120