Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq30562 138 8e-28 >seq30562 Length=7703 Score = 138 bits (152), Expect = 8e-28 Identities = 138/178 (78%), Gaps = 1/178 (1%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||||| |||||||| || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 720 CATGTTTGTGTACTCAGCGCCAAAGTGCCTCCACTGGAAACCGTACACGGGTCCGAGGTC 661 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || || |||| || || ||||| |||| ||||| | ||| || ||||| || Sbjct 660 GCCCTCCTCTCTGTCTGTGAACCCGCTCTTGTCCAGGAAGTCCCGGGAGCCGTTGGCATC 601 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAA 25949 ||||||| | ||||| ||||| |||||||| |||| ||||| || |||| |||||| Sbjct 600 CCAGATCCTCACCCCTTTCTCCGAGAGCTCCTTGGCATTTGTTGATCCCTGAGACGAA 543 Score = 118 bits (130), Expect = 7e-22 Identities = 115/147 (78%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||||||||||||| || || || |||| ||||| Sbjct 1699 GCGATCATGTATGTGAGCAGTGCATAGCTGGCGATGTTGAAAGGCACTCCGAGGCCCATA 1640 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 || ||| || | |||||| ||||||||||| ||||| |||||| |||||| |||||||| Sbjct 1639 TCGCCC-GAGCGCTGGTACAGCTGACACGACAGCTCACCGTCGCACACGTAGAACTGACA 1581 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTAT 25652 | || || ||| || || ||||| || Sbjct 1580 GAGGGCGTGGCAGGGCGGCAGAGCCAT 1554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339586001192526