Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq97926 149 2e-30 >seq97926 Length=3727 Score = 149 bits (164), Expect = 2e-30 Identities = 499/773 (65%), Gaps = 24/773 (3%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| | || || | | ||| || ||||| | || ||| |||| Sbjct 680 TTCACCCACGCCTCCCCCACTCTCTTCAACGCAGGAACCAACAGGCCTCAGCTGTCCAGC 739 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || || ||||||||||| |||||| || || | |||||| || ||| | Sbjct 740 TGCTTCCTGCTCGCCATGAAGGACGACAGCATCGAAGGCATTTATGACACGCTGAAGCAG 799 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726 || || || || ||||| || || |||||||| || | || | |||| Sbjct 800 TGCGCCCTCATCTCCAAATCAGCGGGAGGAATTGGCGTGGCTGTCAGC--------TGCA 851 Query 363727 -CAGAACA-------GTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCA 363778 |||| || | ||||| |||||| || |||| || || || || |||| Sbjct 852 TCAGATCAACCGGGAGCTACATCGCCGGCACCAACGGCAACTCCAACGGCCTAGTCCCCA 911 Query 363779 TGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAG 363838 |||| | || | |||| || || | |||||||||||||| || ||| | | Sbjct 912 TGCTGAGAGTTTACAACAACACGGCACGTTACGTCGACCAGGGAGGCAACAAGAGACCCG 971 Query 363839 GGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCC 363898 | || || || ||||| || ||||| || ||| | |||||||| | ||||| Sbjct 972 GAGCCTTCGCCATGTACCTGGAGCCGTGGCACTTTGATGTGTTTGAGTTCTTGGAGCTGA 1031 Query 363899 GGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 ||||||||| || || ||||| | || | || || ||||| | || ||| | Sbjct 1032 AGAAAAACACAGGGAAGGAGGAGCAAAGAGCCAGAGACCTTTTCTACGGCCTGTGGATCC 1091 Query 363959 CTGACCATTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACAC 364017 | |||| || |||||| | ||||| ||| |||| | |||| || | || || || Sbjct 1092 CGGACCTCTTCATGAAGAGAGTGGAAAGCAACCAAGACT-GGTCTCTGATGTGTCCGAAC 1150 Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 || ||| || || || ||||| || || | || || || ||| || ||| Sbjct 1151 GAGGCTCCTGGGCTGGATGAGTGCTGGGGGGAGGAGTTTGAGGCGCTCTACACCAAATAT 1210 Query 364078 GAATCGGAGGGAAAGGCT---CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATC 364134 || |||||| || ||| | | || ||| | || ||| ||||| Sbjct 1211 GAGAAGGAGGGCCGGGTCAAGCGTGTGGTGAAG---GCTCAGCAACTGTGGCACGCCATT 1267 Query 364135 ATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC 364194 || || || |||| || || || ||||| || ||| |||||||||| | |||||| | Sbjct 1268 ATTGAGTCCCAGACAGAAACCGGTACACCGTACATGCTGTACAAAGACGCCTGCAACAGG 1327 Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATT 364254 ||| |||||||||| | || || || || | |||||||| || || ||||| || Sbjct 1328 AAGAGCAACCAGCAGAATCTGGGCACCATCAAATGCAGCAACCTCTGCACAGAGATCGTT 1387 Query 364255 GAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 ||||||||| | ||||||| || || ||||| || ||||| ||||| || Sbjct 1388 GAATACACCAGTGACGACGAGGTGGCGGTCTGTAATCTGGCGTCCATCGCTCT 1440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301131568654484