Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq85215 93.3 3e-14 >seq85215 Length=7700 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||| || | ||| || ||||||||||| || ||||||||||||| Sbjct 6880 CCTCCACGGAGACGCAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 6821 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||| || || || || | || | || ||| ||||| ||| Sbjct 6820 AGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCGAAGATCAACCTCTGCTGGTCAGGAGGG 6761 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| ||||| || || ||||| ||| || | | | ||||| | |||||| Sbjct 6760 ATGCCTTCTTTATCCTGGATCTTTGC--CTTGACGTTTTCAATGGTGTCACTGGGCTCGA 6703 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | |||||||| || || || || || || ||||| ||||||||||| Sbjct 6702 CCTCTAAAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATTTT 6651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404431071575380